Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 RPS9P1-201ENST00000419943 583 ntBASIC15.35■□□□□ 0.05
VARS2Q5ST30 AL807761.2-201ENST00000422849 729 ntBASIC15.35■□□□□ 0.05
VARS2Q5ST30 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 AL161932.2-201ENST00000435436 679 ntBASIC15.35■□□□□ 0.05
VARS2Q5ST30 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 AC114947.1-202ENST00000514136 344 ntBASIC15.35■□□□□ 0.05
VARS2Q5ST30 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 AC138894.2-201ENST00000602838 371 ntBASIC15.35■□□□□ 0.05
VARS2Q5ST30 AC007326.1-201ENST00000604539 458 ntBASIC15.35■□□□□ 0.05
VARS2Q5ST30 COX6A1P2-201ENST00000620597 330 ntBASIC15.35■□□□□ 0.05
VARS2Q5ST30 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VARS2Q5ST30 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
VARS2Q5ST30 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 AP000356.3-201ENST00000382243 753 ntBASIC15.34■□□□□ 0.05
VARS2Q5ST30 AC234644.1-201ENST00000406065 370 ntBASIC15.34■□□□□ 0.05
VARS2Q5ST30 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 MTND2P40-201ENST00000436718 841 ntBASIC15.34■□□□□ 0.05
VARS2Q5ST30 AL022319.1-201ENST00000458183 1167 ntBASIC15.34■□□□□ 0.05
VARS2Q5ST30 RN7SL181P-201ENST00000462921 277 ntBASIC15.34■□□□□ 0.05
VARS2Q5ST30 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 AC022447.6-201ENST00000515522 438 ntBASIC15.34■□□□□ 0.05
VARS2Q5ST30 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 AC140658.4-201ENST00000561990 352 ntBASIC15.34■□□□□ 0.05
VARS2Q5ST30 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 AC074138.1-201ENST00000611182 1303 ntBASIC15.34■□□□□ 0.05
VARS2Q5ST30 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.34■□□□□ 0.05
VARS2Q5ST30 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VARS2Q5ST30 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VARS2Q5ST30 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VARS2Q5ST30 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VARS2Q5ST30 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VARS2Q5ST30 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
VARS2Q5ST30 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.33■□□□□ 0.04
VARS2Q5ST30 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.33■□□□□ 0.04
VARS2Q5ST30 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.33■□□□□ 0.04
VARS2Q5ST30 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.33■□□□□ 0.04
VARS2Q5ST30 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC15.33■□□□□ 0.04
VARS2Q5ST30 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.33■□□□□ 0.04
VARS2Q5ST30 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.33■□□□□ 0.04
VARS2Q5ST30 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms