Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 AC092580.1-201ENST00000433998 658 ntBASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 AC104073.2-201ENST00000453737 312 ntBASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 AC068587.8-201ENST00000641239 219 ntBASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.57■□□□□ 0.08
CBWD3Q5JTY5 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 FAM90A12P-201ENST00000519497 2375 ntBASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 FAM90A24P-201ENST00000520792 2369 ntBASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 MIR1908-201ENST00000410394 80 ntBASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 AC091271.1-201ENST00000611877 1162 ntBASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 AC004923.1-202ENST00000642106 209 ntBASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 AP002353.1-201ENST00000528257 1599 ntBASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CBWD3Q5JTY5 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CBWD3Q5JTY5 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CBWD3Q5JTY5 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CBWD3Q5JTY5 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CBWD3Q5JTY5 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CBWD3Q5JTY5 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CBWD3Q5JTY5 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CBWD3Q5JTY5 AC072061.1-201ENST00000569710 2234 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms