Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.55■□□□□ 0.24
USH1GQ495M9 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.55■□□□□ 0.24
USH1GQ495M9 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.55■□□□□ 0.24
USH1GQ495M9 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 AL627231.1-201ENST00000394467 1125 ntBASIC16.55■□□□□ 0.24
USH1GQ495M9 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.55■□□□□ 0.24
USH1GQ495M9 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.55■□□□□ 0.24
USH1GQ495M9 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.55■□□□□ 0.24
USH1GQ495M9 AP000358.1-201ENST00000456260 156 ntBASIC16.55■□□□□ 0.24
USH1GQ495M9 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.55■□□□□ 0.24
USH1GQ495M9 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.55■□□□□ 0.24
USH1GQ495M9 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.55■□□□□ 0.24
USH1GQ495M9 AC093752.3-201ENST00000567343 901 ntBASIC16.55■□□□□ 0.24
USH1GQ495M9 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.55■□□□□ 0.24
USH1GQ495M9 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.55■□□□□ 0.24
USH1GQ495M9 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.55■□□□□ 0.24
USH1GQ495M9 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.55■□□□□ 0.24
USH1GQ495M9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
USH1GQ495M9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
USH1GQ495M9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
USH1GQ495M9 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
USH1GQ495M9 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
USH1GQ495M9 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USH1GQ495M9 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.55■□□□□ 0.24
USH1GQ495M9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
USH1GQ495M9 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USH1GQ495M9 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USH1GQ495M9 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.54■□□□□ 0.24
USH1GQ495M9 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USH1GQ495M9 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
USH1GQ495M9 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.54■□□□□ 0.24
USH1GQ495M9 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USH1GQ495M9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USH1GQ495M9 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USH1GQ495M9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USH1GQ495M9 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USH1GQ495M9 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.54■□□□□ 0.24
USH1GQ495M9 KRT17P5-201ENST00000332088 839 ntBASIC16.54■□□□□ 0.24
USH1GQ495M9 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USH1GQ495M9 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USH1GQ495M9 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.54■□□□□ 0.24
USH1GQ495M9 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.54■□□□□ 0.24
USH1GQ495M9 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.54■□□□□ 0.24
USH1GQ495M9 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USH1GQ495M9 FTLP1-201ENST00000449155 526 ntBASIC16.54■□□□□ 0.24
USH1GQ495M9 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.54■□□□□ 0.24
USH1GQ495M9 AC019193.1-201ENST00000506678 823 ntBASIC16.54■□□□□ 0.24
USH1GQ495M9 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.54■□□□□ 0.24
USH1GQ495M9 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.54■□□□□ 0.24
USH1GQ495M9 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.54■□□□□ 0.24
USH1GQ495M9 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.54■□□□□ 0.24
USH1GQ495M9 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.54■□□□□ 0.24
USH1GQ495M9 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.54■□□□□ 0.24
USH1GQ495M9 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.54■□□□□ 0.24
USH1GQ495M9 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
USH1GQ495M9 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
USH1GQ495M9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
USH1GQ495M9 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.54■□□□□ 0.24
USH1GQ495M9 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
USH1GQ495M9 BRD7P5-201ENST00000299197 1822 ntBASIC16.54■□□□□ 0.24
USH1GQ495M9 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USH1GQ495M9 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.54■□□□□ 0.24
USH1GQ495M9 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USH1GQ495M9 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.54■□□□□ 0.24
USH1GQ495M9 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
USH1GQ495M9 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.53■□□□□ 0.24
USH1GQ495M9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USH1GQ495M9 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USH1GQ495M9 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
USH1GQ495M9 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USH1GQ495M9 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USH1GQ495M9 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
USH1GQ495M9 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USH1GQ495M9 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USH1GQ495M9 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.53■□□□□ 0.24
USH1GQ495M9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USH1GQ495M9 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USH1GQ495M9 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USH1GQ495M9 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USH1GQ495M9 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USH1GQ495M9 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms