Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.97□□□□□ -0.17
PCDH1Q08174 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.97□□□□□ -0.17
PCDH1Q08174 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDH1Q08174 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDH1Q08174 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDH1Q08174 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDH1Q08174 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PCDH1Q08174 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
PCDH1Q08174 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
PCDH1Q08174 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.97□□□□□ -0.17
PCDH1Q08174 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDH1Q08174 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCDH1Q08174 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCDH1Q08174 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.96□□□□□ -0.17
PCDH1Q08174 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 LINC01230-201ENST00000625222 3017 ntBASIC13.96□□□□□ -0.17
PCDH1Q08174 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.96□□□□□ -0.17
PCDH1Q08174 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
PCDH1Q08174 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PCDH1Q08174 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.96□□□□□ -0.17
PCDH1Q08174 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
PCDH1Q08174 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.96□□□□□ -0.17
PCDH1Q08174 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.96□□□□□ -0.17
PCDH1Q08174 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PCDH1Q08174 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.96□□□□□ -0.17
PCDH1Q08174 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PCDH1Q08174 YBX1P6-201ENST00000442962 1002 ntBASIC13.96□□□□□ -0.17
PCDH1Q08174 HSPB1P2-201ENST00000448722 546 ntBASIC13.96□□□□□ -0.17
PCDH1Q08174 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.96□□□□□ -0.17
PCDH1Q08174 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.96□□□□□ -0.17
PCDH1Q08174 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.96□□□□□ -0.17
PCDH1Q08174 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.96□□□□□ -0.17
PCDH1Q08174 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.96□□□□□ -0.17
PCDH1Q08174 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.96□□□□□ -0.17
PCDH1Q08174 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.96□□□□□ -0.17
PCDH1Q08174 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.96□□□□□ -0.17
PCDH1Q08174 AC017083.2-201ENST00000608069 979 ntBASIC13.96□□□□□ -0.17
PCDH1Q08174 BAP1-211ENST00000615113 489 ntBASIC13.96□□□□□ -0.17
PCDH1Q08174 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.96□□□□□ -0.17
PCDH1Q08174 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
PCDH1Q08174 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.96□□□□□ -0.17
PCDH1Q08174 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PCDH1Q08174 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.96□□□□□ -0.17
PCDH1Q08174 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCDH1Q08174 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.96□□□□□ -0.17
PCDH1Q08174 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCDH1Q08174 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.96□□□□□ -0.18
PCDH1Q08174 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PCDH1Q08174 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCDH1Q08174 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCDH1Q08174 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
PCDH1Q08174 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.96□□□□□ -0.18
PCDH1Q08174 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCDH1Q08174 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.95□□□□□ -0.18
PCDH1Q08174 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PCDH1Q08174 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDH1Q08174 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.95□□□□□ -0.18
PCDH1Q08174 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDH1Q08174 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.95□□□□□ -0.18
PCDH1Q08174 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PCDH1Q08174 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
PCDH1Q08174 AC144522.1-201ENST00000625111 1658 ntBASIC13.95□□□□□ -0.18
PCDH1Q08174 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PCDH1Q08174 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PCDH1Q08174 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.95□□□□□ -0.18
PCDH1Q08174 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
PCDH1Q08174 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
PCDH1Q08174 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.95□□□□□ -0.18
PCDH1Q08174 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.95□□□□□ -0.18
PCDH1Q08174 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCDH1Q08174 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PCDH1Q08174 TUBB8P8-201ENST00000458717 1058 ntBASIC13.95□□□□□ -0.18
PCDH1Q08174 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.95□□□□□ -0.18
PCDH1Q08174 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.95□□□□□ -0.18
PCDH1Q08174 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.95□□□□□ -0.18
PCDH1Q08174 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.95□□□□□ -0.18
PCDH1Q08174 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.95□□□□□ -0.18
PCDH1Q08174 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.95□□□□□ -0.18
PCDH1Q08174 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.95□□□□□ -0.18
PCDH1Q08174 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.95□□□□□ -0.18
PCDH1Q08174 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.95□□□□□ -0.18
PCDH1Q08174 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms