Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SSBP1Q04837 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 AL358781.1-202ENST00000321081 1360 ntBASIC12.24□□□□□ -0.45
SSBP1Q04837 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SSBP1Q04837 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SSBP1Q04837 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.24□□□□□ -0.45
SSBP1Q04837 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
SSBP1Q04837 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.24□□□□□ -0.45
SSBP1Q04837 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SSBP1Q04837 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SSBP1Q04837 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.24□□□□□ -0.45
SSBP1Q04837 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 PGAM5P1-201ENST00000518923 814 ntBASIC12.24□□□□□ -0.45
SSBP1Q04837 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.24□□□□□ -0.45
SSBP1Q04837 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.24□□□□□ -0.45
SSBP1Q04837 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.24□□□□□ -0.45
SSBP1Q04837 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.24□□□□□ -0.45
SSBP1Q04837 AC120045.2-201ENST00000567334 178 ntBASIC12.24□□□□□ -0.45
SSBP1Q04837 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.24□□□□□ -0.45
SSBP1Q04837 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 AL031719.1-201ENST00000623365 2587 ntBASIC12.24□□□□□ -0.45
SSBP1Q04837 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 AC002472.3-201ENST00000640124 621 ntBASIC12.24□□□□□ -0.45
SSBP1Q04837 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.24□□□□□ -0.45
SSBP1Q04837 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SSBP1Q04837 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SSBP1Q04837 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP1Q04837 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SSBP1Q04837 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SSBP1Q04837 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.23□□□□□ -0.45
SSBP1Q04837 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 PI4KAP2-201ENST00000360806 2080 ntBASIC12.23□□□□□ -0.45
SSBP1Q04837 INTS4P2-202ENST00000614726 2019 ntBASIC12.23□□□□□ -0.45
SSBP1Q04837 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.23□□□□□ -0.45
SSBP1Q04837 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.23□□□□□ -0.45
SSBP1Q04837 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SSBP1Q04837 AC108024.1-201ENST00000626286 1721 ntBASIC12.23□□□□□ -0.45
SSBP1Q04837 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP1Q04837 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms