Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 AC079776.1-201ENST00000401540 1152 ntBASIC12.28□□□□□ -0.44
COL10A1Q03692 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 MIR1909-201ENST00000411312 80 ntBASIC12.28□□□□□ -0.44
COL10A1Q03692 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.28□□□□□ -0.44
COL10A1Q03692 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.28□□□□□ -0.44
COL10A1Q03692 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.28□□□□□ -0.44
COL10A1Q03692 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.28□□□□□ -0.44
COL10A1Q03692 HIST2H2BB-201ENST00000449108 381 ntBASIC12.28□□□□□ -0.44
COL10A1Q03692 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.28□□□□□ -0.44
COL10A1Q03692 GPR53P-205ENST00000457298 1084 ntBASIC12.28□□□□□ -0.44
COL10A1Q03692 ACA64.2-201ENST00000459014 129 ntBASIC12.28□□□□□ -0.44
COL10A1Q03692 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.28□□□□□ -0.44
COL10A1Q03692 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.28□□□□□ -0.44
COL10A1Q03692 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.28□□□□□ -0.44
COL10A1Q03692 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.28□□□□□ -0.44
COL10A1Q03692 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.28□□□□□ -0.44
COL10A1Q03692 SNX29P1-201ENST00000548357 1007 ntBASIC12.28□□□□□ -0.44
COL10A1Q03692 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.28□□□□□ -0.44
COL10A1Q03692 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.28□□□□□ -0.44
COL10A1Q03692 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 AC008687.7-202ENST00000637404 953 ntBASIC12.28□□□□□ -0.44
COL10A1Q03692 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
COL10A1Q03692 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.28□□□□□ -0.44
COL10A1Q03692 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
COL10A1Q03692 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 SHC1P1-201ENST00000425230 1745 ntBASIC12.28□□□□□ -0.44
COL10A1Q03692 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
COL10A1Q03692 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.28□□□□□ -0.44
COL10A1Q03692 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
COL10A1Q03692 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 AC009093.10-201ENST00000641956 1442 ntBASIC12.28□□□□□ -0.44
COL10A1Q03692 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
COL10A1Q03692 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.27□□□□□ -0.44
COL10A1Q03692 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
COL10A1Q03692 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
COL10A1Q03692 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.27□□□□□ -0.44
COL10A1Q03692 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
COL10A1Q03692 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
COL10A1Q03692 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
COL10A1Q03692 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
COL10A1Q03692 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
COL10A1Q03692 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
COL10A1Q03692 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.27□□□□□ -0.44
COL10A1Q03692 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
COL10A1Q03692 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.27□□□□□ -0.44
COL10A1Q03692 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
COL10A1Q03692 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
COL10A1Q03692 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.27□□□□□ -0.44
COL10A1Q03692 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
COL10A1Q03692 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
COL10A1Q03692 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.27□□□□□ -0.44
COL10A1Q03692 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.44
COL10A1Q03692 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
COL10A1Q03692 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
COL10A1Q03692 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
COL10A1Q03692 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.44
COL10A1Q03692 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
COL10A1Q03692 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
COL10A1Q03692 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
COL10A1Q03692 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
COL10A1Q03692 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 ANKRD19P-201ENST00000338192 862 ntBASIC12.27□□□□□ -0.45
COL10A1Q03692 MIR326-201ENST00000362220 95 ntBASIC12.27□□□□□ -0.45
COL10A1Q03692 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.27□□□□□ -0.45
COL10A1Q03692 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.27□□□□□ -0.45
COL10A1Q03692 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.27□□□□□ -0.45
COL10A1Q03692 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.27□□□□□ -0.45
COL10A1Q03692 IGHV3-71-201ENST00000523324 359 ntBASIC12.27□□□□□ -0.45
COL10A1Q03692 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.27□□□□□ -0.45
COL10A1Q03692 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.27□□□□□ -0.45
COL10A1Q03692 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.27□□□□□ -0.45
COL10A1Q03692 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.27□□□□□ -0.45
COL10A1Q03692 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.27□□□□□ -0.45
COL10A1Q03692 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
COL10A1Q03692 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.27□□□□□ -0.45
COL10A1Q03692 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms