Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 AC112191.1-201ENST00000523689 701 ntBASIC11.33□□□□□ -0.6
ERVFC1-1P60608 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 KRT18P28-201ENST00000453838 1332 ntBASIC11.33□□□□□ -0.6
ERVFC1-1P60608 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ERVFC1-1P60608 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 AC215219.1-201ENST00000400706 1817 ntBASIC11.32□□□□□ -0.6
ERVFC1-1P60608 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 CLK3P2-201ENST00000427566 1453 ntBASIC11.32□□□□□ -0.6
ERVFC1-1P60608 AL157414.3-201ENST00000624276 1954 ntBASIC11.32□□□□□ -0.6
ERVFC1-1P60608 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 LBH-203ENST00000404397 543 ntTSL 4 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 AC026992.2-203ENST00000563004 2419 ntBASIC11.32□□□□□ -0.6
ERVFC1-1P60608 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 HSPA8P5-201ENST00000456928 2069 ntBASIC11.32□□□□□ -0.6
ERVFC1-1P60608 AP000437.1-201ENST00000624057 2085 ntBASIC11.32□□□□□ -0.6
ERVFC1-1P60608 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC11.32□□□□□ -0.6
ERVFC1-1P60608 AKAP8P1-201ENST00000434743 1349 ntBASIC11.32□□□□□ -0.6
ERVFC1-1P60608 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms