Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NUP98P52948 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.46■□□□□ 0.39
NUP98P52948 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUP98P52948 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUP98P52948 ACTBP7-201ENST00000418351 1124 ntBASIC17.46■□□□□ 0.39
NUP98P52948 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.46■□□□□ 0.39
NUP98P52948 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.46■□□□□ 0.39
NUP98P52948 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NUP98P52948 AC079250.1-201ENST00000456046 531 ntBASIC17.46■□□□□ 0.39
NUP98P52948 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC17.46■□□□□ 0.39
NUP98P52948 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC17.46■□□□□ 0.39
NUP98P52948 TBC1D3P6-201ENST00000505954 962 ntBASIC17.46■□□□□ 0.39
NUP98P52948 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUP98P52948 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC17.46■□□□□ 0.39
NUP98P52948 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.39
NUP98P52948 AC012158.2-201ENST00000536546 354 ntBASIC17.46■□□□□ 0.39
NUP98P52948 AC132812.1-201ENST00000583145 892 ntBASIC17.46■□□□□ 0.39
NUP98P52948 EIF5AP2-201ENST00000585668 1047 ntBASIC17.46■□□□□ 0.39
NUP98P52948 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC17.46■□□□□ 0.39
NUP98P52948 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC17.46■□□□□ 0.39
NUP98P52948 Z98885.3-201ENST00000624882 1757 ntBASIC17.46■□□□□ 0.39
NUP98P52948 NRADDP-202ENST00000641269 1585 ntBASIC17.46■□□□□ 0.39
NUP98P52948 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NUP98P52948 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUP98P52948 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NUP98P52948 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.46■□□□□ 0.39
NUP98P52948 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.46■□□□□ 0.38
NUP98P52948 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NUP98P52948 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
NUP98P52948 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NUP98P52948 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC17.45■□□□□ 0.38
NUP98P52948 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC17.45■□□□□ 0.38
NUP98P52948 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NUP98P52948 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NUP98P52948 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.45■□□□□ 0.38
NUP98P52948 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NUP98P52948 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NUP98P52948 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NUP98P52948 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
NUP98P52948 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC17.45■□□□□ 0.38
NUP98P52948 OR51A9P-201ENST00000422578 911 ntBASIC17.45■□□□□ 0.38
NUP98P52948 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NUP98P52948 ZNF877P-201ENST00000437614 612 ntBASIC17.45■□□□□ 0.38
NUP98P52948 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC17.45■□□□□ 0.38
NUP98P52948 URAHP-205ENST00000610227 398 ntBASIC17.45■□□□□ 0.38
NUP98P52948 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC17.45■□□□□ 0.38
NUP98P52948 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC17.45■□□□□ 0.38
NUP98P52948 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NUP98P52948 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NUP98P52948 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NUP98P52948 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NUP98P52948 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NUP98P52948 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NUP98P52948 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.45■□□□□ 0.38
NUP98P52948 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NUP98P52948 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NUP98P52948 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17.45■□□□□ 0.38
NUP98P52948 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NUP98P52948 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NUP98P52948 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NUP98P52948 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NUP98P52948 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC17.44■□□□□ 0.38
NUP98P52948 GGNBP1-204ENST00000613113 887 ntBASIC17.44■□□□□ 0.38
NUP98P52948 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.44■□□□□ 0.38
NUP98P52948 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NUP98P52948 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.44■□□□□ 0.38
NUP98P52948 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NUP98P52948 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NUP98P52948 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC17.44■□□□□ 0.38
NUP98P52948 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC17.44■□□□□ 0.38
NUP98P52948 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC17.44■□□□□ 0.38
NUP98P52948 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC17.44■□□□□ 0.38
NUP98P52948 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.44■□□□□ 0.38
NUP98P52948 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.44■□□□□ 0.38
NUP98P52948 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC17.44■□□□□ 0.38
NUP98P52948 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC17.44■□□□□ 0.38
NUP98P52948 AC090643.2-201ENST00000623442 2029 ntBASIC17.44■□□□□ 0.38
NUP98P52948 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NUP98P52948 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.44■□□□□ 0.38
NUP98P52948 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms