Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.18□□□□□ -0.3
HMGA2P52926 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 AL445250.1-201ENST00000641671 2259 ntBASIC13.18□□□□□ -0.3
HMGA2P52926 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HMGA2P52926 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMGA2P52926 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.18□□□□□ -0.3
HMGA2P52926 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
HMGA2P52926 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.17□□□□□ -0.3
HMGA2P52926 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 AC061965.1-201ENST00000560524 1465 ntBASIC13.17□□□□□ -0.3
HMGA2P52926 AC025183.3-201ENST00000623526 1482 ntBASIC13.17□□□□□ -0.3
HMGA2P52926 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.17□□□□□ -0.3
HMGA2P52926 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HMGA2P52926 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.17□□□□□ -0.3
HMGA2P52926 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.17□□□□□ -0.3
HMGA2P52926 MSNP1-201ENST00000511640 1732 ntBASIC13.17□□□□□ -0.3
HMGA2P52926 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 POM121L14P-201ENST00000406100 1558 ntBASIC13.17□□□□□ -0.3
HMGA2P52926 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HMGA2P52926 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
HMGA2P52926 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HMGA2P52926 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 AL136309.1-201ENST00000403917 691 ntBASIC13.17□□□□□ -0.3
HMGA2P52926 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.17□□□□□ -0.3
HMGA2P52926 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.17□□□□□ -0.3
HMGA2P52926 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.17□□□□□ -0.3
HMGA2P52926 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.17□□□□□ -0.3
HMGA2P52926 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.17□□□□□ -0.3
HMGA2P52926 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.17□□□□□ -0.3
HMGA2P52926 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.17□□□□□ -0.3
HMGA2P52926 MIR5189-201ENST00000577370 114 ntBASIC13.17□□□□□ -0.3
HMGA2P52926 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.17□□□□□ -0.3
HMGA2P52926 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.17□□□□□ -0.3
HMGA2P52926 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.17□□□□□ -0.3
HMGA2P52926 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HMGA2P52926 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.17□□□□□ -0.3
HMGA2P52926 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.17□□□□□ -0.3
HMGA2P52926 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.17□□□□□ -0.3
HMGA2P52926 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.17□□□□□ -0.3
HMGA2P52926 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 SALL4P6-201ENST00000429385 1691 ntBASIC13.17□□□□□ -0.3
HMGA2P52926 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HMGA2P52926 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HMGA2P52926 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.17□□□□□ -0.3
HMGA2P52926 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.17□□□□□ -0.3
HMGA2P52926 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.17□□□□□ -0.3
HMGA2P52926 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.17□□□□□ -0.3
HMGA2P52926 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.17□□□□□ -0.3
HMGA2P52926 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HMGA2P52926 RCC2P1-201ENST00000452257 1476 ntBASIC13.16□□□□□ -0.3
HMGA2P52926 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HMGA2P52926 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.16□□□□□ -0.3
HMGA2P52926 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 SHMT1P1-201ENST00000419974 1312 ntBASIC13.16□□□□□ -0.3
HMGA2P52926 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 MIR497HG-202ENST00000572453 3838 ntBASIC13.16□□□□□ -0.3
HMGA2P52926 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.16□□□□□ -0.3
HMGA2P52926 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.16□□□□□ -0.3
HMGA2P52926 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HMGA2P52926 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.16□□□□□ -0.3
HMGA2P52926 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HMGA2P52926 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 547.1 ms