Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
GRIA1P42261 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GRIA1P42261 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GRIA1P42261 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GRIA1P42261 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
GRIA1P42261 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.65□□□□□ -0.06
GRIA1P42261 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
GRIA1P42261 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
GRIA1P42261 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
GRIA1P42261 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.65□□□□□ -0.06
GRIA1P42261 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
GRIA1P42261 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.65□□□□□ -0.06
GRIA1P42261 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
GRIA1P42261 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.65□□□□□ -0.06
GRIA1P42261 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.65□□□□□ -0.06
GRIA1P42261 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.65□□□□□ -0.06
GRIA1P42261 MIR1909-201ENST00000411312 80 ntBASIC14.65□□□□□ -0.06
GRIA1P42261 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.65□□□□□ -0.06
GRIA1P42261 AC106886.1-201ENST00000568660 600 ntBASIC14.65□□□□□ -0.06
GRIA1P42261 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.65□□□□□ -0.06
GRIA1P42261 BAP1-211ENST00000615113 489 ntBASIC14.65□□□□□ -0.06
GRIA1P42261 MIR6775-201ENST00000617557 69 ntBASIC14.65□□□□□ -0.06
GRIA1P42261 AC015909.5-201ENST00000624336 2266 ntBASIC14.65□□□□□ -0.06
GRIA1P42261 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.65□□□□□ -0.06
GRIA1P42261 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
GRIA1P42261 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.65□□□□□ -0.06
GRIA1P42261 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
GRIA1P42261 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.65□□□□□ -0.06
GRIA1P42261 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
GRIA1P42261 AC015818.8-201ENST00000587907 1519 ntBASIC14.65□□□□□ -0.06
GRIA1P42261 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GRIA1P42261 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
GRIA1P42261 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GRIA1P42261 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GRIA1P42261 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GRIA1P42261 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GRIA1P42261 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GRIA1P42261 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GRIA1P42261 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
GRIA1P42261 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.64□□□□□ -0.07
GRIA1P42261 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GRIA1P42261 AC067750.1-201ENST00000608826 6545 ntBASIC14.64□□□□□ -0.07
GRIA1P42261 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GRIA1P42261 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GRIA1P42261 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GRIA1P42261 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.64□□□□□ -0.07
GRIA1P42261 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GRIA1P42261 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GRIA1P42261 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GRIA1P42261 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.64□□□□□ -0.07
GRIA1P42261 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.64□□□□□ -0.07
GRIA1P42261 ST13P19-201ENST00000442505 1124 ntBASIC14.64□□□□□ -0.07
GRIA1P42261 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.64□□□□□ -0.07
GRIA1P42261 GAPDHP21-201ENST00000450301 1010 ntBASIC14.64□□□□□ -0.07
GRIA1P42261 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.64□□□□□ -0.07
GRIA1P42261 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
GRIA1P42261 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.64□□□□□ -0.07
GRIA1P42261 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GRIA1P42261 MIR4741-201ENST00000579822 90 ntBASIC14.64□□□□□ -0.07
GRIA1P42261 AL162274.1-201ENST00000617191 1098 ntBASIC14.64□□□□□ -0.07
GRIA1P42261 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.64□□□□□ -0.07
GRIA1P42261 Z98259.2-201ENST00000641583 609 ntBASIC14.64□□□□□ -0.07
GRIA1P42261 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.64□□□□□ -0.07
GRIA1P42261 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.64□□□□□ -0.07
GRIA1P42261 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
GRIA1P42261 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GRIA1P42261 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GRIA1P42261 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms