Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC19.03■□□□□ 0.64
USP6P35125 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC19.03■□□□□ 0.64
USP6P35125 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
USP6P35125 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC19.03■□□□□ 0.64
USP6P35125 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC19.03■□□□□ 0.64
USP6P35125 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP6P35125 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC19.03■□□□□ 0.64
USP6P35125 AC083801.1-201ENST00000491689 358 ntBASIC19.03■□□□□ 0.64
USP6P35125 AL359219.1-201ENST00000556311 934 ntBASIC19.03■□□□□ 0.64
USP6P35125 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
USP6P35125 AP003392.6-201ENST00000607709 325 ntBASIC19.03■□□□□ 0.64
USP6P35125 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC19.03■□□□□ 0.64
USP6P35125 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP6P35125 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
USP6P35125 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP6P35125 ZNF436-AS1-201ENST00000335648 2547 ntBASIC19.03■□□□□ 0.64
USP6P35125 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC19.03■□□□□ 0.64
USP6P35125 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
USP6P35125 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC19.03■□□□□ 0.64
USP6P35125 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
USP6P35125 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP6P35125 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP6P35125 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP6P35125 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
USP6P35125 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP6P35125 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP6P35125 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC19.02■□□□□ 0.64
USP6P35125 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
USP6P35125 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
USP6P35125 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP6P35125 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP6P35125 AC005722.1-201ENST00000431878 964 ntBASIC19.02■□□□□ 0.64
USP6P35125 HLA-DPA2-205ENST00000433582 733 ntBASIC19.02■□□□□ 0.64
USP6P35125 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC19.02■□□□□ 0.64
USP6P35125 AC092903.1-201ENST00000466506 262 ntBASIC19.02■□□□□ 0.64
USP6P35125 FAM86KP-201ENST00000509817 987 ntBASIC19.02■□□□□ 0.64
USP6P35125 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC19.02■□□□□ 0.64
USP6P35125 AC068831.5-201ENST00000557387 328 ntBASIC19.02■□□□□ 0.64
USP6P35125 AC023968.2-201ENST00000560593 1049 ntBASIC19.02■□□□□ 0.64
USP6P35125 MT3-202ENST00000561640 514 ntTSL 3 BASIC19.02■□□□□ 0.64
USP6P35125 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
USP6P35125 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP6P35125 AC073869.4-201ENST00000620841 800 ntBASIC19.02■□□□□ 0.64
USP6P35125 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC19.02■□□□□ 0.64
USP6P35125 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP6P35125 AC092115.1-201ENST00000566277 1402 ntBASIC19.02■□□□□ 0.64
USP6P35125 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC19.02■□□□□ 0.64
USP6P35125 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC19.02■□□□□ 0.64
USP6P35125 DDC-204ENST00000426377 1700 ntTSL 3 BASIC19.02■□□□□ 0.64
USP6P35125 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP6P35125 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP6P35125 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
USP6P35125 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP6P35125 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP6P35125 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
USP6P35125 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP6P35125 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
USP6P35125 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.01■□□□□ 0.63
USP6P35125 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
USP6P35125 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
USP6P35125 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC19.01■□□□□ 0.63
USP6P35125 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP6P35125 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC19.01■□□□□ 0.63
USP6P35125 AL929302.1-201ENST00000426556 871 ntBASIC19.01■□□□□ 0.63
USP6P35125 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
USP6P35125 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC19.01■□□□□ 0.63
USP6P35125 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC19.01■□□□□ 0.63
USP6P35125 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC19.01■□□□□ 0.63
USP6P35125 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
USP6P35125 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
USP6P35125 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC19.01■□□□□ 0.63
USP6P35125 AC005274.1-201ENST00000623460 802 ntBASIC19.01■□□□□ 0.63
USP6P35125 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP6P35125 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP6P35125 AC020910.6-201ENST00000623084 1459 ntBASIC19.01■□□□□ 0.63
USP6P35125 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP6P35125 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
USP6P35125 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP6P35125 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP6P35125 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC19.01■□□□□ 0.63
USP6P35125 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP6P35125 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC19.01■□□□□ 0.63
USP6P35125 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP6P35125 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP6P35125 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC19.01■□□□□ 0.63
USP6P35125 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC19.01■□□□□ 0.63
USP6P35125 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC19■□□□□ 0.63
USP6P35125 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
USP6P35125 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC19■□□□□ 0.63
USP6P35125 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC19■□□□□ 0.63
USP6P35125 OR10N1P-201ENST00000392758 869 ntBASIC19■□□□□ 0.63
USP6P35125 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC19■□□□□ 0.63
USP6P35125 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC19■□□□□ 0.63
USP6P35125 AL451000.1-201ENST00000451300 1186 ntBASIC19■□□□□ 0.63
USP6P35125 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC19■□□□□ 0.63
USP6P35125 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP6P35125 HNRNPA1P5-201ENST00000558213 966 ntBASIC19■□□□□ 0.63
USP6P35125 AC005777.1-201ENST00000588332 187 ntBASIC19■□□□□ 0.63
USP6P35125 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms