Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHRNA3P32297 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRNA3P32297 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.3■□□□□ 0.04
CHRNA3P32297 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.29■□□□□ 0.04
CHRNA3P32297 AC015909.5-201ENST00000624336 2266 ntBASIC15.29■□□□□ 0.04
CHRNA3P32297 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.29■□□□□ 0.04
CHRNA3P32297 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CHRNA3P32297 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.29■□□□□ 0.04
CHRNA3P32297 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 CICP8-201ENST00000455800 2813 ntBASIC15.29■□□□□ 0.04
CHRNA3P32297 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 TUBB8P4-201ENST00000511806 1324 ntBASIC15.29■□□□□ 0.04
CHRNA3P32297 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CHRNA3P32297 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 FAM86MP-201ENST00000340703 885 ntBASIC15.29■□□□□ 0.04
CHRNA3P32297 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 BRWD1P1-201ENST00000401091 371 ntBASIC15.29■□□□□ 0.04
CHRNA3P32297 MIR1908-201ENST00000410394 80 ntBASIC15.29■□□□□ 0.04
CHRNA3P32297 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.29■□□□□ 0.04
CHRNA3P32297 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.29■□□□□ 0.04
CHRNA3P32297 FAM8A4P-201ENST00000435433 1213 ntBASIC15.29■□□□□ 0.04
CHRNA3P32297 RPL13AP20-201ENST00000459725 609 ntBASIC15.29■□□□□ 0.04
CHRNA3P32297 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CHRNA3P32297 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.29■□□□□ 0.04
CHRNA3P32297 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.29■□□□□ 0.04
CHRNA3P32297 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.29■□□□□ 0.04
CHRNA3P32297 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 RN7SL560P-201ENST00000577943 264 ntBASIC15.29■□□□□ 0.04
CHRNA3P32297 RN7SL219P-201ENST00000582872 296 ntBASIC15.29■□□□□ 0.04
CHRNA3P32297 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.29■□□□□ 0.04
CHRNA3P32297 AC004466.1-201ENST00000599515 1080 ntBASIC15.29■□□□□ 0.04
CHRNA3P32297 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.29■□□□□ 0.04
CHRNA3P32297 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.29■□□□□ 0.04
CHRNA3P32297 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.29■□□□□ 0.04
CHRNA3P32297 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.29■□□□□ 0.04
CHRNA3P32297 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CHRNA3P32297 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.29■□□□□ 0.04
CHRNA3P32297 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.29■□□□□ 0.04
CHRNA3P32297 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CHRNA3P32297 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRNA3P32297 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA3P32297 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA3P32297 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA3P32297 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA3P32297 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA3P32297 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CHRNA3P32297 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.28■□□□□ 0.04
CHRNA3P32297 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA3P32297 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CHRNA3P32297 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA3P32297 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.28■□□□□ 0.04
CHRNA3P32297 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CHRNA3P32297 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.28■□□□□ 0.04
CHRNA3P32297 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA3P32297 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CHRNA3P32297 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.28■□□□□ 0.04
CHRNA3P32297 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.28■□□□□ 0.04
CHRNA3P32297 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CHRNA3P32297 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA3P32297 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.28■□□□□ 0.04
CHRNA3P32297 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.28■□□□□ 0.04
CHRNA3P32297 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.28■□□□□ 0.04
CHRNA3P32297 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.28■□□□□ 0.04
CHRNA3P32297 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRNA3P32297 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CHRNA3P32297 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRNA3P32297 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms