Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 AC064801.2-201ENST00000625052 1303 ntBASIC17.39■□□□□ 0.37
CHRNA5P30532 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA5P30532 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CHRNA5P30532 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.39■□□□□ 0.37
CHRNA5P30532 PAUPAR-201ENST00000630360 2965 ntBASIC17.39■□□□□ 0.37
CHRNA5P30532 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA5P30532 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNA5P30532 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA5P30532 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA5P30532 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA5P30532 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA5P30532 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA5P30532 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHRNA5P30532 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CHRNA5P30532 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA5P30532 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA5P30532 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.38■□□□□ 0.37
CHRNA5P30532 CCL25-202ENST00000315626 450 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA5P30532 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC17.38■□□□□ 0.37
CHRNA5P30532 AL121949.3-201ENST00000406684 385 ntBASIC17.38■□□□□ 0.37
CHRNA5P30532 AHCYP3-201ENST00000420053 1279 ntBASIC17.38■□□□□ 0.37
CHRNA5P30532 AL137244.1-201ENST00000422931 865 ntBASIC17.38■□□□□ 0.37
CHRNA5P30532 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC17.38■□□□□ 0.37
CHRNA5P30532 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CHRNA5P30532 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA5P30532 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA5P30532 AC004801.1-201ENST00000549557 360 ntBASIC17.38■□□□□ 0.37
CHRNA5P30532 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA5P30532 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA5P30532 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 AC020931.1-201ENST00000589622 1346 ntBASIC17.38■□□□□ 0.37
CHRNA5P30532 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA5P30532 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHRNA5P30532 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA5P30532 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRNA5P30532 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRNA5P30532 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA5P30532 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRNA5P30532 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHRNA5P30532 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
CHRNA5P30532 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRNA5P30532 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRNA5P30532 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRNA5P30532 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRNA5P30532 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.37■□□□□ 0.37
CHRNA5P30532 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC17.37■□□□□ 0.37
CHRNA5P30532 DPY19L2P4-201ENST00000479881 442 ntBASIC17.37■□□□□ 0.37
CHRNA5P30532 AC147876.1-201ENST00000504408 322 ntBASIC17.37■□□□□ 0.37
CHRNA5P30532 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRNA5P30532 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRNA5P30532 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRNA5P30532 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRNA5P30532 AC004466.2-201ENST00000614749 516 ntBASIC17.37■□□□□ 0.37
CHRNA5P30532 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC17.37■□□□□ 0.37
CHRNA5P30532 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CHRNA5P30532 AL357143.1-203ENST00000639750 881 ntBASIC17.37■□□□□ 0.37
CHRNA5P30532 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRNA5P30532 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRNA5P30532 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA5P30532 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA5P30532 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA5P30532 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHRNA5P30532 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNA5P30532 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA5P30532 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA5P30532 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CHRNA5P30532 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA5P30532 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA5P30532 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNA5P30532 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA5P30532 FAU-201ENST00000279259 461 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms