Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 BAP1-211ENST00000615113 489 ntBASIC13.74□□□□□ -0.21
PTPN6P29350 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PTPN6P29350 AC068760.1-201ENST00000493579 1953 ntBASIC13.74□□□□□ -0.21
PTPN6P29350 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 AC107918.4-201ENST00000641966 3141 ntBASIC13.74□□□□□ -0.21
PTPN6P29350 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.74□□□□□ -0.21
PTPN6P29350 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
PTPN6P29350 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PTPN6P29350 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PTPN6P29350 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.74□□□□□ -0.21
PTPN6P29350 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 AHCYP2-201ENST00000430630 1300 ntBASIC13.73□□□□□ -0.21
PTPN6P29350 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
PTPN6P29350 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 MIR1202-201ENST00000408529 83 ntBASIC13.73□□□□□ -0.21
PTPN6P29350 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.73□□□□□ -0.21
PTPN6P29350 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.73□□□□□ -0.21
PTPN6P29350 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 RNA5SP412-201ENST00000516234 123 ntBASIC13.73□□□□□ -0.21
PTPN6P29350 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.73□□□□□ -0.21
PTPN6P29350 MIR4683-201ENST00000579659 81 ntBASIC13.73□□□□□ -0.21
PTPN6P29350 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.73□□□□□ -0.21
PTPN6P29350 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.73□□□□□ -0.21
PTPN6P29350 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 CICP8-201ENST00000455800 2813 ntBASIC13.73□□□□□ -0.21
PTPN6P29350 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.73□□□□□ -0.21
PTPN6P29350 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PTPN6P29350 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PTPN6P29350 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PTPN6P29350 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.72□□□□□ -0.21
PTPN6P29350 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms