Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 BAP1-211ENST00000615113 489 ntBASIC13.74□□□□□ -0.21
PTPN6P29350 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PTPN6P29350 AC068760.1-201ENST00000493579 1953 ntBASIC13.74□□□□□ -0.21
PTPN6P29350 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 AC107918.4-201ENST00000641966 3141 ntBASIC13.74□□□□□ -0.21
PTPN6P29350 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.74□□□□□ -0.21
PTPN6P29350 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
PTPN6P29350 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PTPN6P29350 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PTPN6P29350 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.74□□□□□ -0.21
PTPN6P29350 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 AHCYP2-201ENST00000430630 1300 ntBASIC13.73□□□□□ -0.21
PTPN6P29350 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
PTPN6P29350 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 MIR1202-201ENST00000408529 83 ntBASIC13.73□□□□□ -0.21
PTPN6P29350 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.73□□□□□ -0.21
PTPN6P29350 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.73□□□□□ -0.21
PTPN6P29350 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 RNA5SP412-201ENST00000516234 123 ntBASIC13.73□□□□□ -0.21
PTPN6P29350 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.73□□□□□ -0.21
PTPN6P29350 MIR4683-201ENST00000579659 81 ntBASIC13.73□□□□□ -0.21
PTPN6P29350 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.73□□□□□ -0.21
PTPN6P29350 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.73□□□□□ -0.21
PTPN6P29350 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 CICP8-201ENST00000455800 2813 ntBASIC13.73□□□□□ -0.21
PTPN6P29350 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.73□□□□□ -0.21
PTPN6P29350 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.73□□□□□ -0.21
PTPN6P29350 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PTPN6P29350 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PTPN6P29350 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PTPN6P29350 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PTPN6P29350 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PTPN6P29350 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.72□□□□□ -0.21
PTPN6P29350 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PTPN6P29350 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms