Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14□□□□□ -0.17
CAPN3P20807 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14□□□□□ -0.17
CAPN3P20807 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 NCLP1-201ENST00000445357 1963 ntBASIC14□□□□□ -0.17
CAPN3P20807 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14□□□□□ -0.17
CAPN3P20807 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CAPN3P20807 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.99□□□□□ -0.17
CAPN3P20807 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.99□□□□□ -0.17
CAPN3P20807 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.99□□□□□ -0.17
CAPN3P20807 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.99□□□□□ -0.17
CAPN3P20807 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CAPN3P20807 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.99□□□□□ -0.17
CAPN3P20807 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CAPN3P20807 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.99□□□□□ -0.17
CAPN3P20807 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.99□□□□□ -0.17
CAPN3P20807 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.99□□□□□ -0.17
CAPN3P20807 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.99□□□□□ -0.17
CAPN3P20807 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.99□□□□□ -0.17
CAPN3P20807 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 CLUHP2-201ENST00000426660 1303 ntBASIC13.99□□□□□ -0.17
CAPN3P20807 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.99□□□□□ -0.17
CAPN3P20807 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CAPN3P20807 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.99□□□□□ -0.17
CAPN3P20807 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.99□□□□□ -0.17
CAPN3P20807 AC098850.1-201ENST00000419919 790 ntBASIC13.99□□□□□ -0.17
CAPN3P20807 FAM21FP-201ENST00000426241 1131 ntBASIC13.99□□□□□ -0.17
CAPN3P20807 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
CAPN3P20807 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.99□□□□□ -0.17
CAPN3P20807 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.99□□□□□ -0.17
CAPN3P20807 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CAPN3P20807 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.99□□□□□ -0.17
CAPN3P20807 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CAPN3P20807 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.99□□□□□ -0.17
CAPN3P20807 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.99□□□□□ -0.17
CAPN3P20807 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.99□□□□□ -0.17
CAPN3P20807 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.99□□□□□ -0.17
CAPN3P20807 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CAPN3P20807 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.99□□□□□ -0.17
CAPN3P20807 WFDC1-204ENST00000613603 549 ntBASIC13.99□□□□□ -0.17
CAPN3P20807 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.99□□□□□ -0.17
CAPN3P20807 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.99□□□□□ -0.17
CAPN3P20807 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.99□□□□□ -0.17
CAPN3P20807 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.99□□□□□ -0.17
CAPN3P20807 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CAPN3P20807 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.98□□□□□ -0.17
CAPN3P20807 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.98□□□□□ -0.17
CAPN3P20807 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.98□□□□□ -0.17
CAPN3P20807 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CAPN3P20807 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CAPN3P20807 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CAPN3P20807 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.98□□□□□ -0.17
CAPN3P20807 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CAPN3P20807 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CAPN3P20807 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CAPN3P20807 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CAPN3P20807 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.98□□□□□ -0.17
CAPN3P20807 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms