Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
DEFA4P12838 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.86□□□□□ -0.51
DEFA4P12838 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.86□□□□□ -0.51
DEFA4P12838 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC11.86□□□□□ -0.51
DEFA4P12838 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.86□□□□□ -0.51
DEFA4P12838 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
DEFA4P12838 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.86□□□□□ -0.51
DEFA4P12838 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
DEFA4P12838 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.86□□□□□ -0.51
DEFA4P12838 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
DEFA4P12838 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 CIC-204ENST00000572681 8218 ntTSL 5 BASIC11.86□□□□□ -0.51
DEFA4P12838 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.86□□□□□ -0.51
DEFA4P12838 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
DEFA4P12838 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 AC236430.1-201ENST00000402231 743 ntBASIC11.86□□□□□ -0.51
DEFA4P12838 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC11.86□□□□□ -0.51
DEFA4P12838 GOLGA6L11P-201ENST00000417252 1298 ntBASIC11.86□□□□□ -0.51
DEFA4P12838 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.86□□□□□ -0.51
DEFA4P12838 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.86□□□□□ -0.51
DEFA4P12838 AC002472.2-201ENST00000442739 958 ntBASIC11.86□□□□□ -0.51
DEFA4P12838 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.86□□□□□ -0.51
DEFA4P12838 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.86□□□□□ -0.51
DEFA4P12838 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.86□□□□□ -0.51
DEFA4P12838 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
DEFA4P12838 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.86□□□□□ -0.51
DEFA4P12838 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
DEFA4P12838 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
DEFA4P12838 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
DEFA4P12838 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.86□□□□□ -0.51
DEFA4P12838 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
DEFA4P12838 KRT8P35-201ENST00000483942 1338 ntBASIC11.86□□□□□ -0.51
DEFA4P12838 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
DEFA4P12838 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
DEFA4P12838 STK40-201ENST00000359297 4837 ntTSL 2 BASIC11.85□□□□□ -0.51
DEFA4P12838 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.85□□□□□ -0.51
DEFA4P12838 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.85□□□□□ -0.51
DEFA4P12838 NUTM2HP-201ENST00000442076 2498 ntBASIC11.85□□□□□ -0.51
DEFA4P12838 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
DEFA4P12838 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.85□□□□□ -0.51
DEFA4P12838 SALL4P5-201ENST00000419001 1760 ntBASIC11.85□□□□□ -0.51
DEFA4P12838 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
DEFA4P12838 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
DEFA4P12838 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.85□□□□□ -0.51
DEFA4P12838 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC11.85□□□□□ -0.51
DEFA4P12838 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.85□□□□□ -0.51
DEFA4P12838 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.85□□□□□ -0.51
DEFA4P12838 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.85□□□□□ -0.51
DEFA4P12838 ACKR1-201ENST00000368121 1240 ntBASIC11.85□□□□□ -0.51
DEFA4P12838 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
DEFA4P12838 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.85□□□□□ -0.51
DEFA4P12838 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC11.85□□□□□ -0.51
DEFA4P12838 LSM5-207ENST00000410044 687 ntTSL 3 BASIC11.85□□□□□ -0.51
DEFA4P12838 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
DEFA4P12838 AC098850.1-201ENST00000419919 790 ntBASIC11.85□□□□□ -0.51
DEFA4P12838 AC007969.1-201ENST00000433675 447 ntBASIC11.85□□□□□ -0.51
DEFA4P12838 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC11.85□□□□□ -0.51
DEFA4P12838 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC11.85□□□□□ -0.51
DEFA4P12838 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
DEFA4P12838 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.85□□□□□ -0.51
DEFA4P12838 SPCS2P1-201ENST00000561636 679 ntBASIC11.85□□□□□ -0.51
DEFA4P12838 KSR1-207ENST00000578981 748 ntTSL 4 BASIC11.85□□□□□ -0.51
DEFA4P12838 RN7SL204P-201ENST00000582831 262 ntBASIC11.85□□□□□ -0.51
DEFA4P12838 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC11.85□□□□□ -0.51
DEFA4P12838 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms