Protein–RNA interactions for Protein: P0DJI8

SAA1, Serum amyloid A-1 protein, humanhuman

Predicted RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA1P0DJI8 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 AL022313.4-201ENST00000562756 2046 ntBASIC11.69□□□□□ -0.54
SAA1P0DJI8 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 AC006001.1-201ENST00000325130 474 ntBASIC11.69□□□□□ -0.54
SAA1P0DJI8 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 AC010141.1-201ENST00000411585 623 ntBASIC11.69□□□□□ -0.54
SAA1P0DJI8 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 COX5BP8-201ENST00000416911 349 ntBASIC11.69□□□□□ -0.54
SAA1P0DJI8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 AL355994.2-201ENST00000447882 704 ntBASIC11.69□□□□□ -0.54
SAA1P0DJI8 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 AC104506.1-201ENST00000609247 429 ntBASIC11.69□□□□□ -0.54
SAA1P0DJI8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.69□□□□□ -0.54
SAA1P0DJI8 SHC1P1-201ENST00000425230 1745 ntBASIC11.69□□□□□ -0.54
SAA1P0DJI8 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
SAA1P0DJI8 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 AHCYP2-201ENST00000430630 1300 ntBASIC11.68□□□□□ -0.54
SAA1P0DJI8 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 MIR326-201ENST00000362220 95 ntBASIC11.68□□□□□ -0.54
SAA1P0DJI8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.68□□□□□ -0.54
SAA1P0DJI8 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SAA1P0DJI8 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms