Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXC6P09630 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HOXC6P09630 AP002414.2-201ENST00000591780 3365 ntBASIC16.13■□□□□ 0.17
HOXC6P09630 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXC6P09630 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXC6P09630 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXC6P09630 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXC6P09630 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXC6P09630 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.13■□□□□ 0.17
HOXC6P09630 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.13■□□□□ 0.17
HOXC6P09630 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXC6P09630 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HOXC6P09630 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HOXC6P09630 ODCP-201ENST00000459650 1639 ntBASIC16.12■□□□□ 0.17
HOXC6P09630 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.12■□□□□ 0.17
HOXC6P09630 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HOXC6P09630 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HOXC6P09630 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.12■□□□□ 0.17
HOXC6P09630 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HOXC6P09630 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.12■□□□□ 0.17
HOXC6P09630 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HOXC6P09630 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HOXC6P09630 DDX39AP1-201ENST00000445147 1181 ntBASIC16.12■□□□□ 0.17
HOXC6P09630 AC244197.1-201ENST00000456494 951 ntBASIC16.12■□□□□ 0.17
HOXC6P09630 FAM86KP-201ENST00000509817 987 ntBASIC16.12■□□□□ 0.17
HOXC6P09630 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.12■□□□□ 0.17
HOXC6P09630 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HOXC6P09630 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.12■□□□□ 0.17
HOXC6P09630 AP005212.2-201ENST00000584979 510 ntBASIC16.12■□□□□ 0.17
HOXC6P09630 CYP4F36P-201ENST00000589193 186 ntBASIC16.12■□□□□ 0.17
HOXC6P09630 AC006548.2-201ENST00000605217 529 ntBASIC16.12■□□□□ 0.17
HOXC6P09630 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HOXC6P09630 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HOXC6P09630 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HOXC6P09630 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HOXC6P09630 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HOXC6P09630 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.12■□□□□ 0.17
HOXC6P09630 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HOXC6P09630 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HOXC6P09630 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC6P09630 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.11■□□□□ 0.17
HOXC6P09630 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC6P09630 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC6P09630 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC6P09630 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HOXC6P09630 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.11■□□□□ 0.17
HOXC6P09630 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HOXC6P09630 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC6P09630 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.11■□□□□ 0.17
HOXC6P09630 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
HOXC6P09630 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC6P09630 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.11■□□□□ 0.17
HOXC6P09630 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC6P09630 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HOXC6P09630 KRT18P46-201ENST00000435568 1279 ntBASIC16.11■□□□□ 0.17
HOXC6P09630 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.11■□□□□ 0.17
HOXC6P09630 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.11■□□□□ 0.17
HOXC6P09630 RN7SL375P-201ENST00000492442 298 ntBASIC16.11■□□□□ 0.17
HOXC6P09630 AC008026.2-201ENST00000495438 348 ntBASIC16.11■□□□□ 0.17
HOXC6P09630 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.11■□□□□ 0.17
HOXC6P09630 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC16.11■□□□□ 0.17
HOXC6P09630 AC013553.1-201ENST00000560906 267 ntBASIC16.11■□□□□ 0.17
HOXC6P09630 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.11■□□□□ 0.17
HOXC6P09630 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.11■□□□□ 0.17
HOXC6P09630 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC6P09630 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.11■□□□□ 0.17
HOXC6P09630 AC010632.2-201ENST00000588369 1224 ntBASIC16.11■□□□□ 0.17
HOXC6P09630 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HOXC6P09630 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.11■□□□□ 0.17
HOXC6P09630 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.11■□□□□ 0.17
HOXC6P09630 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC6P09630 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC6P09630 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.11■□□□□ 0.17
HOXC6P09630 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC6P09630 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.11■□□□□ 0.17
HOXC6P09630 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC6P09630 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC6P09630 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC6P09630 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.11■□□□□ 0.17
HOXC6P09630 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HOXC6P09630 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.11■□□□□ 0.17
HOXC6P09630 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
HOXC6P09630 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.11■□□□□ 0.17
HOXC6P09630 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HOXC6P09630 KRT8P18-201ENST00000413425 1445 ntBASIC16.11■□□□□ 0.17
HOXC6P09630 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC6P09630 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC6P09630 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HOXC6P09630 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HOXC6P09630 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC6P09630 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC6P09630 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC6P09630 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HOXC6P09630 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HOXC6P09630 MIR566-201ENST00000385187 94 ntBASIC16.1■□□□□ 0.17
HOXC6P09630 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
HOXC6P09630 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.1■□□□□ 0.17
HOXC6P09630 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.1■□□□□ 0.17
HOXC6P09630 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.1■□□□□ 0.17
HOXC6P09630 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms