Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
TPM3P06753 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 MARK2P9-201ENST00000430958 1727 ntBASIC16.3■□□□□ 0.2
TPM3P06753 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM3P06753 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM3P06753 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM3P06753 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC16.3■□□□□ 0.2
TPM3P06753 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TPM3P06753 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.29■□□□□ 0.2
TPM3P06753 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TPM3P06753 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TPM3P06753 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
TPM3P06753 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM3P06753 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM3P06753 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM3P06753 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.29■□□□□ 0.2
TPM3P06753 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TPM3P06753 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TPM3P06753 RN7SL399P-201ENST00000471648 279 ntBASIC16.29■□□□□ 0.2
TPM3P06753 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM3P06753 AC131206.1-201ENST00000538078 1211 ntBASIC16.29■□□□□ 0.2
TPM3P06753 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.29■□□□□ 0.2
TPM3P06753 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.29■□□□□ 0.2
TPM3P06753 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC16.29■□□□□ 0.2
TPM3P06753 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TPM3P06753 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TPM3P06753 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM3P06753 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TPM3P06753 PTPRVP-205ENST00000641549 5067 ntBASIC16.28■□□□□ 0.2
TPM3P06753 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TPM3P06753 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TPM3P06753 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.28■□□□□ 0.2
TPM3P06753 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TPM3P06753 OR2I1P-208ENST00000641137 4948 ntBASIC16.28■□□□□ 0.2
TPM3P06753 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TPM3P06753 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.28■□□□□ 0.2
TPM3P06753 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TPM3P06753 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC16.28■□□□□ 0.2
TPM3P06753 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TPM3P06753 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPM3P06753 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.28■□□□□ 0.2
TPM3P06753 AC092580.3-201ENST00000430932 139 ntBASIC16.28■□□□□ 0.2
TPM3P06753 AC241585.1-201ENST00000433527 519 ntBASIC16.28■□□□□ 0.2
TPM3P06753 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.28■□□□□ 0.2
TPM3P06753 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.28■□□□□ 0.2
TPM3P06753 AL662799.1-202ENST00000614205 422 ntBASIC16.28■□□□□ 0.2
TPM3P06753 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC16.28■□□□□ 0.2
TPM3P06753 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC16.28■□□□□ 0.2
TPM3P06753 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPM3P06753 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC16.28■□□□□ 0.2
TPM3P06753 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPM3P06753 LRRC59-203ENST00000576448 1531 ntBASIC16.28■□□□□ 0.2
TPM3P06753 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TPM3P06753 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC16.28■□□□□ 0.2
TPM3P06753 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TPM3P06753 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC16.28■□□□□ 0.2
TPM3P06753 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPM3P06753 AC004899.2-201ENST00000622993 3860 ntBASIC16.28■□□□□ 0.2
TPM3P06753 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
TPM3P06753 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPM3P06753 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPM3P06753 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPM3P06753 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPM3P06753 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TPM3P06753 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TPM3P06753 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TPM3P06753 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TPM3P06753 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms