Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RB1P06400 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC15.12■□□□□ 0.01
RB1P06400 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RB1P06400 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RB1P06400 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RB1P06400 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.11■□□□□ 0.01
RB1P06400 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.11■□□□□ 0.01
RB1P06400 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.11■□□□□ 0.01
RB1P06400 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RB1P06400 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.11■□□□□ 0.01
RB1P06400 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RB1P06400 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.11■□□□□ 0.01
RB1P06400 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RB1P06400 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RB1P06400 AF274858.1-201ENST00000406288 372 ntBASIC15.11■□□□□ 0.01
RB1P06400 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC15.11■□□□□ 0.01
RB1P06400 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.11■□□□□ 0.01
RB1P06400 AC092573.1-201ENST00000433054 884 ntBASIC15.11■□□□□ 0.01
RB1P06400 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC15.11■□□□□ 0.01
RB1P06400 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.11■□□□□ 0.01
RB1P06400 RN7SKP155-201ENST00000516031 288 ntBASIC15.11■□□□□ 0.01
RB1P06400 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.11■□□□□ 0.01
RB1P06400 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC15.11■□□□□ 0.01
RB1P06400 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.11■□□□□ 0.01
RB1P06400 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC15.11■□□□□ 0.01
RB1P06400 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 RPL13AP3-202ENST00000494676 1473 ntBASIC15.11■□□□□ 0.01
RB1P06400 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.11■□□□□ 0.01
RB1P06400 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RB1P06400 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
RB1P06400 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.11■□□□□ 0.01
RB1P06400 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RB1P06400 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.11■□□□□ 0.01
RB1P06400 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
RB1P06400 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.1■□□□□ 0.01
RB1P06400 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 KRT8P18-201ENST00000413425 1445 ntBASIC15.1■□□□□ 0.01
RB1P06400 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.1■□□□□ 0.01
RB1P06400 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.1■□□□□ 0.01
RB1P06400 AL357373.1-201ENST00000394974 322 ntBASIC15.1■□□□□ 0.01
RB1P06400 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC15.1■□□□□ 0.01
RB1P06400 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC15.1■□□□□ 0.01
RB1P06400 SLC25A15P3-201ENST00000505530 290 ntBASIC15.1■□□□□ 0.01
RB1P06400 HNRNPA1P56-201ENST00000505767 954 ntBASIC15.1■□□□□ 0.01
RB1P06400 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC15.1■□□□□ 0.01
RB1P06400 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC15.1■□□□□ 0.01
RB1P06400 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
RB1P06400 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC15.1■□□□□ 0.01
RB1P06400 AC092862.1-201ENST00000541534 533 ntBASIC15.1■□□□□ 0.01
RB1P06400 BATF-202ENST00000555504 361 ntTSL 2 BASIC15.1■□□□□ 0.01
RB1P06400 DLK1-205ENST00000556051 469 ntTSL 2 BASIC15.1■□□□□ 0.01
RB1P06400 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.1■□□□□ 0.01
RB1P06400 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.1■□□□□ 0.01
RB1P06400 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.1■□□□□ 0.01
RB1P06400 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.1■□□□□ 0.01
RB1P06400 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 COQ4-204ENST00000608951 781 ntTSL 2 BASIC15.1■□□□□ 0.01
RB1P06400 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC15.1■□□□□ 0.01
RB1P06400 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC15.1■□□□□ 0.01
RB1P06400 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.1■□□□□ 0.01
RB1P06400 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
RB1P06400 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RB1P06400 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms