Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TIMP1P01033 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TIMP1P01033 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.3■□□□□ 0.04
TIMP1P01033 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.3■□□□□ 0.04
TIMP1P01033 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC15.3■□□□□ 0.04
TIMP1P01033 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC15.3■□□□□ 0.04
TIMP1P01033 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TIMP1P01033 COQ10BP2-201ENST00000513804 724 ntBASIC15.3■□□□□ 0.04
TIMP1P01033 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC15.3■□□□□ 0.04
TIMP1P01033 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TIMP1P01033 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TIMP1P01033 AL359219.1-201ENST00000556311 934 ntBASIC15.3■□□□□ 0.04
TIMP1P01033 AC079414.2-201ENST00000567157 1104 ntBASIC15.3■□□□□ 0.04
TIMP1P01033 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC15.3■□□□□ 0.04
TIMP1P01033 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC15.3■□□□□ 0.04
TIMP1P01033 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TIMP1P01033 MIR4746-201ENST00000579802 71 ntBASIC15.3■□□□□ 0.04
TIMP1P01033 MIR6074-201ENST00000612054 107 ntBASIC15.3■□□□□ 0.04
TIMP1P01033 AC113385.2-201ENST00000614465 762 ntBASIC15.3■□□□□ 0.04
TIMP1P01033 AC138035.3-201ENST00000622706 2791 ntBASIC15.3■□□□□ 0.04
TIMP1P01033 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TIMP1P01033 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TIMP1P01033 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TIMP1P01033 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TIMP1P01033 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TIMP1P01033 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
TIMP1P01033 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TIMP1P01033 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TIMP1P01033 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TIMP1P01033 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 AC232323.1-201ENST00000540724 2099 ntBASIC15.29■□□□□ 0.04
TIMP1P01033 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TIMP1P01033 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMP1P01033 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TIMP1P01033 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMP1P01033 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMP1P01033 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC15.29■□□□□ 0.04
TIMP1P01033 RPSAP12-201ENST00000435879 888 ntBASIC15.29■□□□□ 0.04
TIMP1P01033 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.29■□□□□ 0.04
TIMP1P01033 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC15.29■□□□□ 0.04
TIMP1P01033 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMP1P01033 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TIMP1P01033 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMP1P01033 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMP1P01033 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC15.29■□□□□ 0.04
TIMP1P01033 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC15.29■□□□□ 0.04
TIMP1P01033 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TIMP1P01033 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TIMP1P01033 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMP1P01033 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TIMP1P01033 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMP1P01033 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMP1P01033 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMP1P01033 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMP1P01033 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMP1P01033 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 AC092115.1-201ENST00000566277 1402 ntBASIC15.28■□□□□ 0.04
TIMP1P01033 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 AL354702.1-201ENST00000442006 1960 ntBASIC15.28■□□□□ 0.04
TIMP1P01033 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TIMP1P01033 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TIMP1P01033 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC15.28■□□□□ 0.04
TIMP1P01033 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC15.28■□□□□ 0.04
TIMP1P01033 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC15.28■□□□□ 0.04
TIMP1P01033 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC15.28■□□□□ 0.04
TIMP1P01033 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC15.28■□□□□ 0.04
TIMP1P01033 AC048382.6-201ENST00000621980 1223 ntBASIC15.28■□□□□ 0.04
TIMP1P01033 CR392039.1-201ENST00000623217 204 ntBASIC15.28■□□□□ 0.04
TIMP1P01033 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TIMP1P01033 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMP1P01033 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms