Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1AO95602 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1AO95602 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC20.38■□□□□ 0.85
POLR1AO95602 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC20.38■□□□□ 0.85
POLR1AO95602 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1AO95602 AC008536.3-201ENST00000623282 1599 ntBASIC20.38■□□□□ 0.85
POLR1AO95602 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1AO95602 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1AO95602 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
POLR1AO95602 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1AO95602 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
POLR1AO95602 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC20.38■□□□□ 0.85
POLR1AO95602 AC108724.1-201ENST00000481669 352 ntBASIC20.38■□□□□ 0.85
POLR1AO95602 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC20.38■□□□□ 0.85
POLR1AO95602 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC20.38■□□□□ 0.85
POLR1AO95602 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC20.38■□□□□ 0.85
POLR1AO95602 AC084262.1-201ENST00000567818 751 ntBASIC20.38■□□□□ 0.85
POLR1AO95602 AL359091.4-201ENST00000610052 409 ntBASIC20.38■□□□□ 0.85
POLR1AO95602 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC20.38■□□□□ 0.85
POLR1AO95602 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
POLR1AO95602 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1AO95602 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1AO95602 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
POLR1AO95602 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1AO95602 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1AO95602 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1AO95602 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC20.37■□□□□ 0.85
POLR1AO95602 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1AO95602 AC006987.1-201ENST00000413610 527 ntBASIC20.37■□□□□ 0.85
POLR1AO95602 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC20.37■□□□□ 0.85
POLR1AO95602 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC20.37■□□□□ 0.85
POLR1AO95602 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC20.37■□□□□ 0.85
POLR1AO95602 AC004801.1-201ENST00000549557 360 ntBASIC20.37■□□□□ 0.85
POLR1AO95602 CES1P2-201ENST00000566467 1242 ntBASIC20.37■□□□□ 0.85
POLR1AO95602 RN7SL602P-201ENST00000578326 324 ntBASIC20.37■□□□□ 0.85
POLR1AO95602 RN7SL718P-201ENST00000581254 303 ntBASIC20.37■□□□□ 0.85
POLR1AO95602 URAHP-205ENST00000610227 398 ntBASIC20.37■□□□□ 0.85
POLR1AO95602 MIR6125-201ENST00000618986 96 ntBASIC20.37■□□□□ 0.85
POLR1AO95602 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
POLR1AO95602 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC20.37■□□□□ 0.85
POLR1AO95602 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC20.37■□□□□ 0.85
POLR1AO95602 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC20.37■□□□□ 0.85
POLR1AO95602 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1AO95602 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1AO95602 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
POLR1AO95602 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1AO95602 TCAM1P-207ENST00000485295 1537 ntBASIC20.37■□□□□ 0.85
POLR1AO95602 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
POLR1AO95602 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1AO95602 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1AO95602 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1AO95602 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC20.37■□□□□ 0.85
POLR1AO95602 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1AO95602 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1AO95602 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1AO95602 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1AO95602 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC20.36■□□□□ 0.85
POLR1AO95602 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1AO95602 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1AO95602 HNRNPA1P25-201ENST00000422644 937 ntBASIC20.36■□□□□ 0.85
POLR1AO95602 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC20.36■□□□□ 0.85
POLR1AO95602 ZNF877P-201ENST00000437614 612 ntBASIC20.36■□□□□ 0.85
POLR1AO95602 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC20.36■□□□□ 0.85
POLR1AO95602 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC20.36■□□□□ 0.85
POLR1AO95602 STK24P1-201ENST00000455035 1291 ntBASIC20.36■□□□□ 0.85
POLR1AO95602 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC20.36■□□□□ 0.85
POLR1AO95602 MIR4746-201ENST00000579802 71 ntBASIC20.36■□□□□ 0.85
POLR1AO95602 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC20.36■□□□□ 0.85
POLR1AO95602 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC20.36■□□□□ 0.85
POLR1AO95602 AC026336.4-201ENST00000624565 1050 ntBASIC20.36■□□□□ 0.85
POLR1AO95602 AC245369.7-201ENST00000631386 350 ntBASIC20.36■□□□□ 0.85
POLR1AO95602 AL009178.2-201ENST00000597278 2719 ntBASIC20.36■□□□□ 0.85
POLR1AO95602 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
POLR1AO95602 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
POLR1AO95602 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC20.36■□□□□ 0.85
POLR1AO95602 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1AO95602 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1AO95602 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1AO95602 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1AO95602 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1AO95602 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
POLR1AO95602 SIRPB3P-201ENST00000340424 1216 ntBASIC20.36■□□□□ 0.85
POLR1AO95602 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC20.36■□□□□ 0.85
POLR1AO95602 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1AO95602 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1AO95602 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1AO95602 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC20.36■□□□□ 0.85
POLR1AO95602 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC20.36■□□□□ 0.85
POLR1AO95602 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC20.36■□□□□ 0.85
POLR1AO95602 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
POLR1AO95602 BX322534.1-201ENST00000635574 241 ntBASIC20.36■□□□□ 0.85
POLR1AO95602 AC215524.1-201ENST00000635696 241 ntBASIC20.36■□□□□ 0.85
POLR1AO95602 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC20.35■□□□□ 0.85
POLR1AO95602 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1AO95602 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms