Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 MIR663B-201ENST00000408361 115 ntBASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 ACTBP11-201ENST00000436287 1126 ntBASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 AL591846.1-201ENST00000451736 433 ntBASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 AC009955.4-201ENST00000597192 544 ntBASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 KRT8P29-201ENST00000420409 1371 ntBASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PARPBPQ9NWS1 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 MIR6720-201ENST00000611664 98 ntBASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 AL162426.1-201ENST00000624141 743 ntBASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 AL731571.1-201ENST00000617058 5428 ntBASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PARPBPQ9NWS1 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms