Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RN7SL219P-201ENST00000582872 296 ntBASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 AC130686.1-201ENST00000622936 2466 ntBASIC15.99■□□□□ 0.15
BLOC1S4Q9NUP1 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 SHMT1P1-201ENST00000419974 1312 ntBASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 AC103592.1-201ENST00000394513 664 ntBASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 AC125604.1-201ENST00000496255 707 ntBASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 RCC2P8-201ENST00000502779 1035 ntBASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 AC092658.1-201ENST00000505836 891 ntBASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 AL645939.5-201ENST00000606834 243 ntBASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 AL022328.3-201ENST00000607943 679 ntBASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 LINC01815-202ENST00000641468 1409 ntBASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BLOC1S4Q9NUP1 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 AC072061.1-201ENST00000569710 2234 ntBASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 AC016700.1-201ENST00000429424 312 ntBASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms