Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 SNX20-205ENST00000610485 557 ntTSL 5 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 MEP1AP1-201ENST00000636082 1097 ntBASIC13.04□□□□□ -0.32
CHD8Q9HCK8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 OR6D1P-203ENST00000641209 4860 ntBASIC13.04□□□□□ -0.32
CHD8Q9HCK8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 IMPDH1P5-201ENST00000439688 1540 ntBASIC13.04□□□□□ -0.32
CHD8Q9HCK8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 SERPINB8P1-201ENST00000401898 377 ntBASIC13.04□□□□□ -0.32
CHD8Q9HCK8 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 RN7SL460P-201ENST00000582806 258 ntBASIC13.04□□□□□ -0.32
CHD8Q9HCK8 RN7SL322P-201ENST00000583519 299 ntBASIC13.04□□□□□ -0.32
CHD8Q9HCK8 AC136475.7-201ENST00000602949 592 ntBASIC13.04□□□□□ -0.32
CHD8Q9HCK8 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 MECP2-226ENST00000640414 897 ntTSL 5 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 KRT18P45-201ENST00000515347 1333 ntBASIC13.04□□□□□ -0.32
CHD8Q9HCK8 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHD8Q9HCK8 AC064850.1-201ENST00000413279 1398 ntBASIC13.03□□□□□ -0.32
CHD8Q9HCK8 FKBP4P7-201ENST00000433874 1363 ntBASIC13.03□□□□□ -0.32
CHD8Q9HCK8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 RBMX2P5-201ENST00000424312 969 ntBASIC13.03□□□□□ -0.32
CHD8Q9HCK8 AC008267.3-201ENST00000448776 712 ntBASIC13.03□□□□□ -0.32
CHD8Q9HCK8 EEF1GP1-201ENST00000457231 1299 ntBASIC13.03□□□□□ -0.32
CHD8Q9HCK8 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 CCND3P2-201ENST00000579393 537 ntBASIC13.03□□□□□ -0.32
CHD8Q9HCK8 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 AC015813.5-201ENST00000624641 1514 ntBASIC13.03□□□□□ -0.32
CHD8Q9HCK8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 Z98885.3-201ENST00000624882 1757 ntBASIC13.03□□□□□ -0.32
CHD8Q9HCK8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHD8Q9HCK8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms