Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 B9D1-206ENST00000461069 923 ntTSL 2 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 OR2A1-AS1-203ENST00000468575 568 ntBASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 ALG1L15P-201ENST00000482834 794 ntBASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 AC011431.1-201ENST00000512971 230 ntBASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 CYP4F23P-201ENST00000593402 1579 ntBASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CNTNAP3Q9BZ76 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 MIR611-201ENST00000384869 67 ntBASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 THAP4-203ENST00000402545 833 ntTSL 5 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 PGAM1P11-201ENST00000416729 680 ntBASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 AC026884.1-201ENST00000418296 457 ntBASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 AL954722.1-201ENST00000431238 259 ntBASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 AC013553.1-201ENST00000560906 267 ntBASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 RN7SL440P-201ENST00000577855 343 ntBASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 AC020910.5-201ENST00000623668 1865 ntBASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 AC006449.6-201ENST00000612330 2296 ntBASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.78□□□□□ -0.2
CNTNAP3Q9BZ76 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
CNTNAP3Q9BZ76 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.77□□□□□ -0.2
CNTNAP3Q9BZ76 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CNTNAP3Q9BZ76 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.77□□□□□ -0.2
CNTNAP3Q9BZ76 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CNTNAP3Q9BZ76 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
CNTNAP3Q9BZ76 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CNTNAP3Q9BZ76 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CNTNAP3Q9BZ76 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
CNTNAP3Q9BZ76 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CNTNAP3Q9BZ76 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CNTNAP3Q9BZ76 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CNTNAP3Q9BZ76 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CNTNAP3Q9BZ76 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CNTNAP3Q9BZ76 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms