Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 MIR5189-201ENST00000577370 114 ntBASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM55Q9BYV6 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 AL442647.2-201ENST00000429864 857 ntBASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 AL162726.2-201ENST00000438986 1017 ntBASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 TDH-203ENST00000531764 1110 ntBASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 AL359711.2-201ENST00000563105 872 ntBASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 AC133539.2-201ENST00000604757 467 ntBASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 AL606495.2-201ENST00000605867 535 ntBASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 AC114271.1-201ENST00000612689 2813 ntBASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 PCDHA5-203ENST00000614258 4248 ntBASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM55Q9BYV6 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 AC090643.2-201ENST00000623442 2029 ntBASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 AC215219.1-201ENST00000400706 1817 ntBASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 AC068760.1-201ENST00000493579 1953 ntBASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM55Q9BYV6 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms