Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 Z97180.1-201ENST00000445173 988 ntBASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 RN7SL11P-201ENST00000471305 293 ntBASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 AC006122.1-201ENST00000493323 440 ntBASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 AC125604.1-201ENST00000496255 707 ntBASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 RCC2P8-201ENST00000502779 1035 ntBASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 SCARNA21-201ENST00000517026 139 ntBASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 SNORD3B-2-202ENST00000571722 791 ntBASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 AL645939.5-201ENST00000606834 243 ntBASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 AC133540.1-201ENST00000620845 1019 ntBASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 NAP1L6-202ENST00000641404 1222 ntBASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 INTS4P1-203ENST00000641008 3683 ntBASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SSBP3Q9BWW4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 TUBBP5-203ENST00000508529 1334 ntBASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 AC041040.2-201ENST00000622926 2899 ntBASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 IGHJ2P-201ENST00000454480 60 ntBASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 AC009779.1-201ENST00000551138 283 ntBASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 FAM90A7P-201ENST00000382628 1395 ntBASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 FAM90A23P-201ENST00000400136 1395 ntBASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 AC136759.1-202ENST00000530858 2194 ntBASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SSBP3Q9BWW4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms