Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 AC026748.1-201ENST00000624349 3251 ntBASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 RN7SL277P-201ENST00000481521 288 ntBASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 AC107464.3-201ENST00000609172 737 ntBASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 AC073911.3-201ENST00000624401 631 ntBASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 AL161773.1-201ENST00000624845 863 ntBASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 AC015688.4-201ENST00000580780 1647 ntBASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 LINC01815-202ENST00000641468 1409 ntBASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SYNGAP1Q96PV0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 AL512306.1-201ENST00000432698 848 ntBASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 AC092638.2-201ENST00000441105 947 ntBASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 AL354861.1-201ENST00000445213 355 ntBASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 AP003398.1-201ENST00000531124 318 ntBASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 AP000911.2-201ENST00000534330 502 ntBASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 AC007191.1-201ENST00000623179 2995 ntBASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 AL161772.1-201ENST00000610494 4412 ntBASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SYNGAP1Q96PV0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 MYO15B-237ENST00000642007 4893 ntBASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 AC097065.1-201ENST00000425737 517 ntBASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 AC092580.1-201ENST00000433998 658 ntBASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 PIN4P1-201ENST00000451079 396 ntBASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 AC138701.2-201ENST00000553634 226 ntBASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.36■□□□□ 0.21
SYNGAP1Q96PV0 RN7SL470P-201ENST00000583069 259 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms