Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 AC015818.8-201ENST00000587907 1519 ntBASIC13.76□□□□□ -0.21
COL21A1Q96P44 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 AC020910.6-201ENST00000623084 1459 ntBASIC13.76□□□□□ -0.21
COL21A1Q96P44 AP000593.2-201ENST00000542775 1433 ntBASIC13.76□□□□□ -0.21
COL21A1Q96P44 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 RN7SKP230-201ENST00000365642 335 ntBASIC13.76□□□□□ -0.21
COL21A1Q96P44 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 KRT223P-202ENST00000449164 1292 ntBASIC13.76□□□□□ -0.21
COL21A1Q96P44 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 COX5BP1-201ENST00000507622 393 ntBASIC13.76□□□□□ -0.21
COL21A1Q96P44 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 GCOM2-201ENST00000509133 1104 ntBASIC13.76□□□□□ -0.21
COL21A1Q96P44 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 AC008687.7-202ENST00000637404 953 ntBASIC13.76□□□□□ -0.21
COL21A1Q96P44 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 DMBT1P1-203ENST00000636837 4628 ntBASIC13.76□□□□□ -0.21
COL21A1Q96P44 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.76□□□□□ -0.21
COL21A1Q96P44 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 COL6A4P2-202ENST00000504443 2753 ntBASIC13.75□□□□□ -0.21
COL21A1Q96P44 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 AC011498.7-201ENST00000624986 2027 ntBASIC13.75□□□□□ -0.21
COL21A1Q96P44 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 RN7SL713P-201ENST00000582127 302 ntBASIC13.75□□□□□ -0.21
COL21A1Q96P44 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.75□□□□□ -0.21
COL21A1Q96P44 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL21A1Q96P44 CICP16-201ENST00000502609 2813 ntBASIC13.75□□□□□ -0.21
COL21A1Q96P44 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms