Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 KRT8P14-201ENST00000414254 1442 ntBASIC12.92□□□□□ -0.34
RFT1Q96AA3 MRPS18AP1-201ENST00000414458 589 ntBASIC12.92□□□□□ -0.34
RFT1Q96AA3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.92□□□□□ -0.34
RFT1Q96AA3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.92□□□□□ -0.34
RFT1Q96AA3 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.92□□□□□ -0.34
RFT1Q96AA3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RFT1Q96AA3 AC072061.1-201ENST00000569710 2234 ntBASIC12.92□□□□□ -0.34
RFT1Q96AA3 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 AP001582.1-201ENST00000525856 295 ntBASIC12.91□□□□□ -0.34
RFT1Q96AA3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 SPDYE22P-201ENST00000582158 798 ntBASIC12.91□□□□□ -0.34
RFT1Q96AA3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 BX539320.1-201ENST00000623759 877 ntBASIC12.91□□□□□ -0.34
RFT1Q96AA3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RFT1Q96AA3 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RFT1Q96AA3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 INTS4P2-202ENST00000614726 2019 ntBASIC12.9□□□□□ -0.34
RFT1Q96AA3 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 AC011840.2-201ENST00000563063 1520 ntBASIC12.9□□□□□ -0.34
RFT1Q96AA3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RFT1Q96AA3 BASP1P1-201ENST00000430708 665 ntBASIC12.9□□□□□ -0.34
RFT1Q96AA3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.9□□□□□ -0.34
RFT1Q96AA3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms