Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 AC152010.1-201ENST00000415779 2006 ntBASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 AC141586.1-203ENST00000567242 366 ntBASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 TUBB8P4-201ENST00000511806 1324 ntBASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNB3Q8WWL7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 NAMA-206ENST00000605377 509 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 LINC00115-201ENST00000473798 1317 ntBASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNB3Q8WWL7 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 RNVU1-8-201ENST00000364272 125 ntBASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 AC006987.1-201ENST00000413610 527 ntBASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 REEP5-205ENST00000504247 480 ntTSL 5 BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 AC005740.1-201ENST00000515639 522 ntBASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 CICP16-201ENST00000502609 2813 ntBASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNB3Q8WWL7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CCNB3Q8WWL7 AC025183.3-201ENST00000623526 1482 ntBASIC21.89■■□□□ 1.09
CCNB3Q8WWL7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC21.89■■□□□ 1.09
CCNB3Q8WWL7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCNB3Q8WWL7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNB3Q8WWL7 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNB3Q8WWL7 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CCNB3Q8WWL7 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCNB3Q8WWL7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCNB3Q8WWL7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 BX679664.3-201ENST00000414070 555 ntBASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 BCAS2P2-201ENST00000425064 674 ntBASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 RN7SL396P-201ENST00000471086 295 ntBASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 AC113935.1-201ENST00000471722 555 ntBASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCNB3Q8WWL7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms