Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
DNAAF1Q8NEP3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
DNAAF1Q8NEP3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
DNAAF1Q8NEP3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
DNAAF1Q8NEP3 LRRC59-203ENST00000576448 1531 ntBASIC12.83□□□□□ -0.35
DNAAF1Q8NEP3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.35
DNAAF1Q8NEP3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 AC083964.2-201ENST00000623988 2396 ntBASIC12.83□□□□□ -0.36
DNAAF1Q8NEP3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 AC072061.1-201ENST00000569710 2234 ntBASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 PMS2P2-201ENST00000425039 1128 ntBASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 EIF3FP3-201ENST00000434851 1086 ntBASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 KRT18P25-201ENST00000508931 1278 ntBASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.82□□□□□ -0.36
DNAAF1Q8NEP3 AC138761.1-201ENST00000584393 385 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms