Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CLDN22Q8N7P3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDN22Q8N7P3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CLDN22Q8N7P3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN22Q8N7P3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CLDN22Q8N7P3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN22Q8N7P3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN22Q8N7P3 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN22Q8N7P3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 AL590640.2-201ENST00000457038 527 ntBASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 RN7SL752P-201ENST00000463779 287 ntBASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 AC011495.1-201ENST00000498085 584 ntBASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 AP001889.1-201ENST00000525414 633 ntBASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 GNRHR2-203ENST00000581100 1187 ntBASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 AC025048.6-201ENST00000634326 1161 ntBASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 AC019294.4-201ENST00000561777 2905 ntBASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLDN22Q8N7P3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 AGAP10P-201ENST00000454844 2418 ntBASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN22Q8N7P3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms