Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 AC234783.1-201ENST00000441761 496 ntBASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 KLF2P4-201ENST00000451959 1225 ntBASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 AC005225.4-201ENST00000557330 545 ntBASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 AL008718.2-201ENST00000609206 1313 ntBASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 AL157407.1-201ENST00000435784 904 ntBASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 RBM8B-201ENST00000555532 525 ntBASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 AC106886.1-201ENST00000568660 600 ntBASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 AC012645.4-201ENST00000610691 1061 ntBASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 AC008687.7-202ENST00000637404 953 ntBASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDKL3Q8IVW4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDKL3Q8IVW4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms