Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 NME2P1-201ENST00000426182 414 ntBASIC12.76□□□□□ -0.37
C11orf88Q6PI97 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 AC011495.1-201ENST00000498085 584 ntBASIC12.76□□□□□ -0.37
C11orf88Q6PI97 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 AC135586.1-201ENST00000539323 574 ntBASIC12.76□□□□□ -0.37
C11orf88Q6PI97 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 AL596325.1-201ENST00000563991 1082 ntBASIC12.76□□□□□ -0.37
C11orf88Q6PI97 TP53TG3HP-202ENST00000569755 579 ntBASIC12.76□□□□□ -0.37
C11orf88Q6PI97 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 AC015818.8-201ENST00000587907 1519 ntBASIC12.76□□□□□ -0.37
C11orf88Q6PI97 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 AL365181.3-201ENST00000605886 3222 ntBASIC12.76□□□□□ -0.37
C11orf88Q6PI97 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
C11orf88Q6PI97 AC083964.2-201ENST00000623988 2396 ntBASIC12.76□□□□□ -0.37
C11orf88Q6PI97 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 FO393414.2-201ENST00000405153 598 ntBASIC12.75□□□□□ -0.37
C11orf88Q6PI97 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 AC004945.1-201ENST00000416738 983 ntBASIC12.75□□□□□ -0.37
C11orf88Q6PI97 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.75□□□□□ -0.37
C11orf88Q6PI97 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms