Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 AL353637.1-201ENST00000451571 732 ntBASIC17.16■□□□□ 0.34
CTR9Q6PD62 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 AC021016.3-201ENST00000608367 477 ntBASIC17.16■□□□□ 0.34
CTR9Q6PD62 AL591471.1-201ENST00000621855 229 ntBASIC17.16■□□□□ 0.34
CTR9Q6PD62 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 LAP3P2-201ENST00000454686 1454 ntBASIC17.16■□□□□ 0.34
CTR9Q6PD62 KRT8P19-201ENST00000551916 1455 ntBASIC17.16■□□□□ 0.34
CTR9Q6PD62 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.16■□□□□ 0.34
CTR9Q6PD62 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CTR9Q6PD62 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 RNA5SP423-201ENST00000517127 109 ntBASIC17.15■□□□□ 0.34
CTR9Q6PD62 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 AC026803.1-201ENST00000569130 274 ntBASIC17.15■□□□□ 0.34
CTR9Q6PD62 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 AL109837.1-201ENST00000603272 613 ntBASIC17.15■□□□□ 0.34
CTR9Q6PD62 AL022334.2-201ENST00000610000 484 ntBASIC17.15■□□□□ 0.34
CTR9Q6PD62 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.15■□□□□ 0.34
CTR9Q6PD62 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTR9Q6PD62 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CTR9Q6PD62 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
CTR9Q6PD62 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CTR9Q6PD62 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CTR9Q6PD62 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CTR9Q6PD62 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CTR9Q6PD62 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTR9Q6PD62 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTR9Q6PD62 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CTR9Q6PD62 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.14■□□□□ 0.33
CTR9Q6PD62 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTR9Q6PD62 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTR9Q6PD62 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTR9Q6PD62 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTR9Q6PD62 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTR9Q6PD62 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTR9Q6PD62 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTR9Q6PD62 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTR9Q6PD62 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTR9Q6PD62 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTR9Q6PD62 ELK2AP-201ENST00000392510 1007 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms