Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 AC099548.2-209ENST00000480264 625 ntBASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 Z98259.2-201ENST00000641583 609 ntBASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 AC004923.1-202ENST00000642106 209 ntBASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 AC004899.1-201ENST00000424687 1714 ntBASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TTC39BQ5VTQ0 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 AC015688.4-201ENST00000580780 1647 ntBASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 AL645933.1-201ENST00000440087 609 ntBASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 RNMTL1P1-201ENST00000454103 560 ntBASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 SCARNA20.5-201ENST00000516991 142 ntBASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 AC013355.1-201ENST00000562625 723 ntBASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 AC244093.1-201ENST00000610837 814 ntBASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 AC138649.2-201ENST00000615886 705 ntBASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 MIR6787-201ENST00000616675 61 ntBASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.11■□□□□ 0.01
TTC39BQ5VTQ0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 AC138028.6-201ENST00000616106 1482 ntBASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 DPM3-202ENST00000368399 517 ntBASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 RBM8B-201ENST00000555532 525 ntBASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 AC103810.3-201ENST00000583567 96 ntBASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TTC39BQ5VTQ0 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms