Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 ABCC6P1-203ENST00000565566 1170 ntBASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 RN7SL121P-201ENST00000584223 273 ntBASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 HCG18-241ENST00000602290 821 ntTSL 2 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 AC064850.1-201ENST00000413279 1398 ntBASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 AC147876.1-201ENST00000504408 322 ntBASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 EEF1DP7-201ENST00000580496 513 ntBASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 RBP4-203ENST00000371469 814 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 KRT18P42-201ENST00000505048 1255 ntBASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 RPS5-205ENST00000598495 800 ntTSL 3 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 PRR20FP-201ENST00000603320 180 ntBASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 RCC2P5-201ENST00000492126 1487 ntBASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 FMO6P-201ENST00000236166 1620 ntBASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS13DQ5THJ4 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 AC079250.1-201ENST00000456046 531 ntBASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 AC140479.7-201ENST00000636301 2332 ntBASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 HLF-202ENST00000430986 1385 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 GH1-203ENST00000351388 685 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 AC092910.2-201ENST00000491262 348 ntBASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 AC132812.1-201ENST00000583145 892 ntBASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13DQ5THJ4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms