Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RFTN2Q52LD8 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 FTH1P14-201ENST00000482930 551 ntBASIC13.94□□□□□ -0.18
RFTN2Q52LD8 COX5BP1-201ENST00000507622 393 ntBASIC13.94□□□□□ -0.18
RFTN2Q52LD8 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 AC078819.1-201ENST00000547454 765 ntBASIC13.94□□□□□ -0.18
RFTN2Q52LD8 AC012085.1-201ENST00000548270 765 ntBASIC13.94□□□□□ -0.18
RFTN2Q52LD8 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 RN7SL713P-201ENST00000582127 302 ntBASIC13.94□□□□□ -0.18
RFTN2Q52LD8 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 AC008825.2-201ENST00000603374 718 ntBASIC13.94□□□□□ -0.18
RFTN2Q52LD8 AL355385.1-201ENST00000606123 409 ntBASIC13.94□□□□□ -0.18
RFTN2Q52LD8 AC244669.2-201ENST00000612320 853 ntBASIC13.94□□□□□ -0.18
RFTN2Q52LD8 AC006453.4-201ENST00000636949 1252 ntBASIC13.94□□□□□ -0.18
RFTN2Q52LD8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.94□□□□□ -0.18
RFTN2Q52LD8 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 AC073548.1-201ENST00000624088 1882 ntBASIC13.93□□□□□ -0.18
RFTN2Q52LD8 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 PPT1-213ENST00000641319 2388 ntBASIC13.93□□□□□ -0.18
RFTN2Q52LD8 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.93□□□□□ -0.18
RFTN2Q52LD8 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 CNN2P8-201ENST00000421872 913 ntBASIC13.93□□□□□ -0.18
RFTN2Q52LD8 AC016694.1-201ENST00000434179 700 ntBASIC13.93□□□□□ -0.18
RFTN2Q52LD8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RFTN2Q52LD8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms