Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SSBP1Q04837 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SSBP1Q04837 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP1Q04837 ACTBP8-201ENST00000403258 1108 ntBASIC12.26□□□□□ -0.45
SSBP1Q04837 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.26□□□□□ -0.45
SSBP1Q04837 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.26□□□□□ -0.45
SSBP1Q04837 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.26□□□□□ -0.45
SSBP1Q04837 HLA-J-203ENST00000494367 1087 ntBASIC12.26□□□□□ -0.45
SSBP1Q04837 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.26□□□□□ -0.45
SSBP1Q04837 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.26□□□□□ -0.45
SSBP1Q04837 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SSBP1Q04837 AL844908.2-201ENST00000609461 460 ntBASIC12.26□□□□□ -0.45
SSBP1Q04837 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.26□□□□□ -0.45
SSBP1Q04837 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP1Q04837 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.26□□□□□ -0.45
SSBP1Q04837 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 AL139385.1-201ENST00000611744 3272 ntBASIC12.26□□□□□ -0.45
SSBP1Q04837 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SSBP1Q04837 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP1Q04837 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP1Q04837 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.26□□□□□ -0.45
SSBP1Q04837 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP1Q04837 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SSBP1Q04837 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP1Q04837 AC060814.4-201ENST00000594169 2163 ntBASIC12.26□□□□□ -0.45
SSBP1Q04837 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SSBP1Q04837 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP1Q04837 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP1Q04837 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
SSBP1Q04837 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.26□□□□□ -0.45
SSBP1Q04837 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 AC002350.2-201ENST00000623894 1828 ntBASIC12.25□□□□□ -0.45
SSBP1Q04837 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 KRT18P13-201ENST00000400056 1290 ntBASIC12.25□□□□□ -0.45
SSBP1Q04837 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 AC003958.1-201ENST00000435883 421 ntBASIC12.25□□□□□ -0.45
SSBP1Q04837 TPM4P1-201ENST00000436100 807 ntBASIC12.25□□□□□ -0.45
SSBP1Q04837 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 FO681548.1-201ENST00000455617 1132 ntBASIC12.25□□□□□ -0.45
SSBP1Q04837 RN7SL399P-201ENST00000471648 279 ntBASIC12.25□□□□□ -0.45
SSBP1Q04837 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 SPDYE22P-201ENST00000582158 798 ntBASIC12.25□□□□□ -0.45
SSBP1Q04837 BRI3BPP1-201ENST00000594224 787 ntBASIC12.25□□□□□ -0.45
SSBP1Q04837 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 KRT8P28-201ENST00000433288 1390 ntBASIC12.25□□□□□ -0.45
SSBP1Q04837 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SSBP1Q04837 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP1Q04837 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP1Q04837 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.25□□□□□ -0.45
SSBP1Q04837 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms