Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.79□□□□□ -0.2
SKP1P63208 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SKP1P63208 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.79□□□□□ -0.2
SKP1P63208 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SKP1P63208 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SKP1P63208 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SKP1P63208 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SKP1P63208 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SKP1P63208 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.79□□□□□ -0.2
SKP1P63208 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SKP1P63208 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SKP1P63208 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SKP1P63208 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SKP1P63208 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SKP1P63208 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.79□□□□□ -0.2
SKP1P63208 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.78□□□□□ -0.2
SKP1P63208 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.78□□□□□ -0.2
SKP1P63208 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.78□□□□□ -0.2
SKP1P63208 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.78□□□□□ -0.2
SKP1P63208 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.78□□□□□ -0.2
SKP1P63208 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.78□□□□□ -0.2
SKP1P63208 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.78□□□□□ -0.2
SKP1P63208 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.78□□□□□ -0.2
SKP1P63208 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.78□□□□□ -0.2
SKP1P63208 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.78□□□□□ -0.2
SKP1P63208 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.78□□□□□ -0.2
SKP1P63208 AL161932.2-201ENST00000435436 679 ntBASIC13.78□□□□□ -0.2
SKP1P63208 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.78□□□□□ -0.2
SKP1P63208 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.78□□□□□ -0.2
SKP1P63208 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.78□□□□□ -0.2
SKP1P63208 HLA-J-204ENST00000495278 958 ntBASIC13.78□□□□□ -0.2
SKP1P63208 MARK2P5-201ENST00000507649 634 ntBASIC13.78□□□□□ -0.2
SKP1P63208 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.78□□□□□ -0.2
SKP1P63208 SCARNA20.5-201ENST00000516991 142 ntBASIC13.78□□□□□ -0.2
SKP1P63208 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.78□□□□□ -0.2
SKP1P63208 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.78□□□□□ -0.2
SKP1P63208 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.78□□□□□ -0.2
SKP1P63208 AC124068.2-201ENST00000569473 1109 ntBASIC13.78□□□□□ -0.2
SKP1P63208 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.78□□□□□ -0.2
SKP1P63208 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.78□□□□□ -0.2
SKP1P63208 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SKP1P63208 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
SKP1P63208 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.78□□□□□ -0.2
SKP1P63208 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SKP1P63208 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 MBLAC2-202ENST00000514906 1936 ntBASIC13.78□□□□□ -0.2
SKP1P63208 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.78□□□□□ -0.2
SKP1P63208 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.78□□□□□ -0.2
SKP1P63208 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SKP1P63208 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.2
SKP1P63208 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SKP1P63208 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SKP1P63208 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SKP1P63208 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SKP1P63208 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SKP1P63208 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
SKP1P63208 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
SKP1P63208 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SKP1P63208 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SKP1P63208 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SKP1P63208 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SKP1P63208 KLF2P1-201ENST00000447438 1042 ntBASIC13.77□□□□□ -0.21
SKP1P63208 LAP3P2-201ENST00000454686 1454 ntBASIC13.77□□□□□ -0.21
SKP1P63208 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.77□□□□□ -0.21
SKP1P63208 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.77□□□□□ -0.21
SKP1P63208 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.77□□□□□ -0.21
SKP1P63208 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.77□□□□□ -0.21
SKP1P63208 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SKP1P63208 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 MIR4538-201ENST00000581377 78 ntBASIC13.77□□□□□ -0.21
SKP1P63208 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms