Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC10.61□□□□□ -0.71
APOC4P55056 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC10.61□□□□□ -0.71
APOC4P55056 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC10.61□□□□□ -0.71
APOC4P55056 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC10.61□□□□□ -0.71
APOC4P55056 KRT18P9-201ENST00000604826 1300 ntBASIC10.61□□□□□ -0.71
APOC4P55056 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC10.61□□□□□ -0.71
APOC4P55056 REXO1L1P-201ENST00000379010 6598 ntBASIC10.61□□□□□ -0.71
APOC4P55056 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 INTS4P1-203ENST00000641008 3683 ntBASIC10.61□□□□□ -0.71
APOC4P55056 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
APOC4P55056 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
APOC4P55056 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC10.61□□□□□ -0.71
APOC4P55056 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
APOC4P55056 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC10.61□□□□□ -0.71
APOC4P55056 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC10.61□□□□□ -0.71
APOC4P55056 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC10.61□□□□□ -0.71
APOC4P55056 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
APOC4P55056 MBP-201ENST00000354542 575 ntTSL 2 BASIC10.61□□□□□ -0.71
APOC4P55056 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC10.61□□□□□ -0.71
APOC4P55056 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC10.61□□□□□ -0.71
APOC4P55056 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC10.61□□□□□ -0.71
APOC4P55056 ST13P19-201ENST00000442505 1124 ntBASIC10.61□□□□□ -0.71
APOC4P55056 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC10.61□□□□□ -0.71
APOC4P55056 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 TPT1P11-201ENST00000458482 498 ntBASIC10.61□□□□□ -0.71
APOC4P55056 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC10.61□□□□□ -0.71
APOC4P55056 RN7SL258P-201ENST00000478664 300 ntBASIC10.61□□□□□ -0.71
APOC4P55056 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 RTN3P1-201ENST00000536295 711 ntBASIC10.61□□□□□ -0.71
APOC4P55056 AC003686.1-201ENST00000550956 1034 ntBASIC10.61□□□□□ -0.71
APOC4P55056 RHOQP1-201ENST00000555758 579 ntBASIC10.61□□□□□ -0.71
APOC4P55056 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
APOC4P55056 COG4-212ENST00000564653 590 ntTSL 5 BASIC10.61□□□□□ -0.71
APOC4P55056 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
APOC4P55056 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 HCG18-245ENST00000602550 559 ntTSL 4 BASIC10.61□□□□□ -0.71
APOC4P55056 AC012044.1-201ENST00000603431 297 ntBASIC10.61□□□□□ -0.71
APOC4P55056 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC10.61□□□□□ -0.71
APOC4P55056 MIR6769A-201ENST00000617340 73 ntBASIC10.61□□□□□ -0.71
APOC4P55056 AC015967.2-201ENST00000624092 234 ntBASIC10.61□□□□□ -0.71
APOC4P55056 AC006435.4-201ENST00000625037 234 ntBASIC10.61□□□□□ -0.71
APOC4P55056 AL356737.1-201ENST00000634391 234 ntBASIC10.61□□□□□ -0.71
APOC4P55056 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC10.61□□□□□ -0.71
APOC4P55056 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC10.61□□□□□ -0.71
APOC4P55056 FAM90A2P-201ENST00000511144 1395 ntBASIC10.61□□□□□ -0.71
APOC4P55056 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 FAM90A25P-201ENST00000528404 1395 ntBASIC10.61□□□□□ -0.71
APOC4P55056 AP002414.2-201ENST00000591780 3365 ntBASIC10.61□□□□□ -0.71
APOC4P55056 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
APOC4P55056 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC10.61□□□□□ -0.71
APOC4P55056 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
APOC4P55056 AL354702.1-201ENST00000442006 1960 ntBASIC10.61□□□□□ -0.71
APOC4P55056 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 LAP3P2-201ENST00000454686 1454 ntBASIC10.61□□□□□ -0.71
APOC4P55056 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
APOC4P55056 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
APOC4P55056 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC10.61□□□□□ -0.71
APOC4P55056 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
APOC4P55056 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
APOC4P55056 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
APOC4P55056 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC10.6□□□□□ -0.71
APOC4P55056 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC10.6□□□□□ -0.71
APOC4P55056 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC10.6□□□□□ -0.71
APOC4P55056 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
APOC4P55056 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
APOC4P55056 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
APOC4P55056 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
APOC4P55056 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
APOC4P55056 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms