Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.55■□□□□ 0.4
TM4SF1P30408 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF1P30408 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF1P30408 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TM4SF1P30408 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF1P30408 AC020931.1-201ENST00000589622 1346 ntBASIC17.55■□□□□ 0.4
TM4SF1P30408 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF1P30408 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF1P30408 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TM4SF1P30408 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TM4SF1P30408 CD81-209ENST00000492627 886 ntTSL 3 BASIC17.55■□□□□ 0.4
TM4SF1P30408 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC17.55■□□□□ 0.4
TM4SF1P30408 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF1P30408 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TM4SF1P30408 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TM4SF1P30408 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.55■□□□□ 0.4
TM4SF1P30408 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TM4SF1P30408 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF1P30408 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF1P30408 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF1P30408 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF1P30408 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF1P30408 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF1P30408 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.55■□□□□ 0.4
TM4SF1P30408 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF1P30408 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.55■□□□□ 0.4
TM4SF1P30408 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TM4SF1P30408 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF1P30408 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF1P30408 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TM4SF1P30408 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC17.54■□□□□ 0.4
TM4SF1P30408 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.54■□□□□ 0.4
TM4SF1P30408 AC015909.5-201ENST00000624336 2266 ntBASIC17.54■□□□□ 0.4
TM4SF1P30408 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TM4SF1P30408 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF1P30408 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TM4SF1P30408 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC17.54■□□□□ 0.4
TM4SF1P30408 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC17.54■□□□□ 0.4
TM4SF1P30408 RPSAP12-201ENST00000435879 888 ntBASIC17.54■□□□□ 0.4
TM4SF1P30408 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC17.54■□□□□ 0.4
TM4SF1P30408 BCL2L12P1-201ENST00000508390 733 ntBASIC17.54■□□□□ 0.4
TM4SF1P30408 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC17.54■□□□□ 0.4
TM4SF1P30408 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC17.54■□□□□ 0.4
TM4SF1P30408 MIR4746-201ENST00000579802 71 ntBASIC17.54■□□□□ 0.4
TM4SF1P30408 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC17.54■□□□□ 0.4
TM4SF1P30408 AC113385.2-201ENST00000614465 762 ntBASIC17.54■□□□□ 0.4
TM4SF1P30408 AC010531.8-201ENST00000623341 685 ntBASIC17.54■□□□□ 0.4
TM4SF1P30408 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC17.54■□□□□ 0.4
TM4SF1P30408 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF1P30408 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF1P30408 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF1P30408 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF1P30408 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TM4SF1P30408 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC17.54■□□□□ 0.4
TM4SF1P30408 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.54■□□□□ 0.4
TM4SF1P30408 SALL4P6-201ENST00000429385 1691 ntBASIC17.54■□□□□ 0.4
TM4SF1P30408 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.54■□□□□ 0.4
TM4SF1P30408 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF1P30408 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF1P30408 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TM4SF1P30408 AC092115.1-201ENST00000566277 1402 ntBASIC17.54■□□□□ 0.4
TM4SF1P30408 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF1P30408 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.54■□□□□ 0.4
TM4SF1P30408 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.54■□□□□ 0.4
TM4SF1P30408 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF1P30408 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TM4SF1P30408 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 AC126177.1-201ENST00000547829 2218 ntBASIC17.53■□□□□ 0.4
TM4SF1P30408 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.53■□□□□ 0.4
TM4SF1P30408 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC17.53■□□□□ 0.4
TM4SF1P30408 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TM4SF1P30408 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.53■□□□□ 0.4
TM4SF1P30408 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TM4SF1P30408 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TM4SF1P30408 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TM4SF1P30408 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC17.53■□□□□ 0.4
TM4SF1P30408 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC17.53■□□□□ 0.4
TM4SF1P30408 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC17.53■□□□□ 0.4
TM4SF1P30408 MIR2278-201ENST00000516344 96 ntBASIC17.53■□□□□ 0.4
TM4SF1P30408 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TM4SF1P30408 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC17.53■□□□□ 0.4
TM4SF1P30408 AC120498.7-201ENST00000562876 330 ntBASIC17.53■□□□□ 0.4
TM4SF1P30408 ANKRD26P1-203ENST00000569528 966 ntBASIC17.53■□□□□ 0.4
TM4SF1P30408 RN7SL605P-201ENST00000577229 281 ntBASIC17.53■□□□□ 0.4
TM4SF1P30408 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC17.53■□□□□ 0.4
TM4SF1P30408 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC17.53■□□□□ 0.4
TM4SF1P30408 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms