Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL354877.1-201ENST00000424412 413 ntBASIC14.31□□□□□ -0.12
CDH3P22223 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH3P22223 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 AC021723.1-201ENST00000486306 515 ntBASIC14.31□□□□□ -0.12
CDH3P22223 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.31□□□□□ -0.12
CDH3P22223 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH3P22223 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH3P22223 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH3P22223 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH3P22223 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CDH3P22223 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.31□□□□□ -0.12
CDH3P22223 MIR6787-201ENST00000616675 61 ntBASIC14.31□□□□□ -0.12
CDH3P22223 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH3P22223 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CDH3P22223 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDH3P22223 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CDH3P22223 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH3P22223 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH3P22223 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH3P22223 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH3P22223 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CDH3P22223 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.31□□□□□ -0.12
CDH3P22223 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.31□□□□□ -0.12
CDH3P22223 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CDH3P22223 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH3P22223 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH3P22223 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH3P22223 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
CDH3P22223 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH3P22223 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH3P22223 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CDH3P22223 SHC1P1-201ENST00000425230 1745 ntBASIC14.3□□□□□ -0.12
CDH3P22223 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDH3P22223 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH3P22223 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH3P22223 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH3P22223 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH3P22223 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH3P22223 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH3P22223 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH3P22223 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH3P22223 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH3P22223 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.3□□□□□ -0.12
CDH3P22223 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.3□□□□□ -0.12
CDH3P22223 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.3□□□□□ -0.12
CDH3P22223 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CDH3P22223 BX640514.1-201ENST00000583223 1918 ntBASIC14.3□□□□□ -0.12
CDH3P22223 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CDH3P22223 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CDH3P22223 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH3P22223 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH3P22223 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDH3P22223 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH3P22223 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 AC089987.1-201ENST00000551654 2209 ntBASIC14.3□□□□□ -0.12
CDH3P22223 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CDH3P22223 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.3□□□□□ -0.12
CDH3P22223 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH3P22223 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH3P22223 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH3P22223 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms