Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 GOLGA2P4-201ENST00000441462 777 ntBASIC14.63□□□□□ -0.07
HLA-DPA1P20036 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 AC005962.1-201ENST00000584100 773 ntBASIC14.63□□□□□ -0.07
HLA-DPA1P20036 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 AP000346.4-201ENST00000614827 381 ntBASIC14.63□□□□□ -0.07
HLA-DPA1P20036 AC133540.1-201ENST00000620845 1019 ntBASIC14.63□□□□□ -0.07
HLA-DPA1P20036 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 AC144522.1-201ENST00000625111 1658 ntBASIC14.62□□□□□ -0.07
HLA-DPA1P20036 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 AC021723.1-201ENST00000486306 515 ntBASIC14.62□□□□□ -0.07
HLA-DPA1P20036 AC006122.1-201ENST00000493323 440 ntBASIC14.62□□□□□ -0.07
HLA-DPA1P20036 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 AL160314.3-201ENST00000556041 767 ntBASIC14.62□□□□□ -0.07
HLA-DPA1P20036 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 AC021016.3-201ENST00000608367 477 ntBASIC14.62□□□□□ -0.07
HLA-DPA1P20036 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 AL096828.3-201ENST00000615354 462 ntBASIC14.62□□□□□ -0.07
HLA-DPA1P20036 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 AL928921.2-201ENST00000641325 2442 ntBASIC14.62□□□□□ -0.07
HLA-DPA1P20036 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPA1P20036 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPA1P20036 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms