Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.4■□□□□ 0.38
NCLP19338 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.4■□□□□ 0.38
NCLP19338 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCLP19338 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
NCLP19338 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
NCLP19338 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NCLP19338 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NCLP19338 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.38
NCLP19338 FAM90A12P-201ENST00000519497 2375 ntBASIC17.39■□□□□ 0.38
NCLP19338 FAM90A24P-201ENST00000520792 2369 ntBASIC17.39■□□□□ 0.38
NCLP19338 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLP19338 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLP19338 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.39■□□□□ 0.37
NCLP19338 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.39■□□□□ 0.37
NCLP19338 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLP19338 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.39■□□□□ 0.37
NCLP19338 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLP19338 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLP19338 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NCLP19338 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.39■□□□□ 0.37
NCLP19338 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLP19338 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.39■□□□□ 0.37
NCLP19338 DGCR5-201ENST00000399539 862 ntBASIC17.39■□□□□ 0.37
NCLP19338 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.39■□□□□ 0.37
NCLP19338 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.39■□□□□ 0.37
NCLP19338 MEIS3P1-201ENST00000495167 958 ntBASIC17.39■□□□□ 0.37
NCLP19338 TPRX2P-201ENST00000535362 881 ntBASIC17.39■□□□□ 0.37
NCLP19338 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.39■□□□□ 0.37
NCLP19338 AC023310.3-201ENST00000557027 670 ntBASIC17.39■□□□□ 0.37
NCLP19338 AC100756.1-201ENST00000562736 682 ntBASIC17.39■□□□□ 0.37
NCLP19338 AC138749.3-201ENST00000567691 622 ntBASIC17.39■□□□□ 0.37
NCLP19338 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.39■□□□□ 0.37
NCLP19338 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCLP19338 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.39■□□□□ 0.37
NCLP19338 AC107373.2-201ENST00000607735 490 ntBASIC17.39■□□□□ 0.37
NCLP19338 AC099568.2-201ENST00000609194 695 ntBASIC17.39■□□□□ 0.37
NCLP19338 AC116165.1-201ENST00000611806 668 ntBASIC17.39■□□□□ 0.37
NCLP19338 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NCLP19338 AC090505.1-201ENST00000430515 1834 ntBASIC17.39■□□□□ 0.37
NCLP19338 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLP19338 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.39■□□□□ 0.37
NCLP19338 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLP19338 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLP19338 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLP19338 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLP19338 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLP19338 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCLP19338 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC17.38■□□□□ 0.37
NCLP19338 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NCLP19338 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.38■□□□□ 0.37
NCLP19338 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.38■□□□□ 0.37
NCLP19338 AC131902.2-201ENST00000566892 2172 ntBASIC17.38■□□□□ 0.37
NCLP19338 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NCLP19338 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
NCLP19338 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC17.38■□□□□ 0.37
NCLP19338 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 AC098614.1-201ENST00000368528 745 ntBASIC17.38■□□□□ 0.37
NCLP19338 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NCLP19338 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.38■□□□□ 0.37
NCLP19338 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 GAPDHP40-201ENST00000505218 1006 ntBASIC17.38■□□□□ 0.37
NCLP19338 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.38■□□□□ 0.37
NCLP19338 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
NCLP19338 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NCLP19338 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 AC093525.8-201ENST00000624099 1342 ntBASIC17.38■□□□□ 0.37
NCLP19338 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
NCLP19338 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC17.38■□□□□ 0.37
NCLP19338 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.38■□□□□ 0.37
NCLP19338 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 AC073957.3-201ENST00000609998 6758 ntBASIC17.38■□□□□ 0.37
NCLP19338 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCLP19338 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
NCLP19338 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NCLP19338 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCLP19338 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLP19338 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLP19338 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.37■□□□□ 0.37
NCLP19338 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLP19338 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCLP19338 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCLP19338 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms