Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC092638.2-201ENST00000441105 947 ntBASIC14.82□□□□□ -0.04
HMGA1P17096 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC14.82□□□□□ -0.04
HMGA1P17096 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA1P17096 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA1P17096 RN7SL788P-201ENST00000460504 316 ntBASIC14.82□□□□□ -0.04
HMGA1P17096 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGA1P17096 MBP-227ENST00000526111 581 ntTSL 4 BASIC14.82□□□□□ -0.04
HMGA1P17096 AC068867.1-201ENST00000559855 150 ntBASIC14.82□□□□□ -0.04
HMGA1P17096 AP000322.3-201ENST00000608665 388 ntBASIC14.82□□□□□ -0.04
HMGA1P17096 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA1P17096 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGA1P17096 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA1P17096 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA1P17096 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA1P17096 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HMGA1P17096 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA1P17096 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HMGA1P17096 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA1P17096 AC090502.4-201ENST00000551714 1386 ntBASIC14.82□□□□□ -0.04
HMGA1P17096 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA1P17096 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGA1P17096 KRT8P18-201ENST00000413425 1445 ntBASIC14.82□□□□□ -0.04
HMGA1P17096 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGA1P17096 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGA1P17096 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA1P17096 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGA1P17096 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGA1P17096 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGA1P17096 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGA1P17096 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGA1P17096 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
HMGA1P17096 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGA1P17096 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGA1P17096 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 USP17L6P-201ENST00000382470 1197 ntBASIC14.81□□□□□ -0.04
HMGA1P17096 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGA1P17096 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.81□□□□□ -0.04
HMGA1P17096 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGA1P17096 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGA1P17096 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.81□□□□□ -0.04
HMGA1P17096 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HMGA1P17096 GOLGA2P8-201ENST00000505201 779 ntBASIC14.81□□□□□ -0.04
HMGA1P17096 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGA1P17096 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGA1P17096 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGA1P17096 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGA1P17096 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
HMGA1P17096 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGA1P17096 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
HMGA1P17096 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGA1P17096 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HMGA1P17096 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGA1P17096 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGA1P17096 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HMGA1P17096 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HMGA1P17096 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMGA1P17096 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGA1P17096 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGA1P17096 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HMGA1P17096 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
HMGA1P17096 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGA1P17096 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGA1P17096 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
HMGA1P17096 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA1P17096 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGA1P17096 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA1P17096 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
HMGA1P17096 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA1P17096 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGA1P17096 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA1P17096 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA1P17096 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGA1P17096 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA1P17096 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA1P17096 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA1P17096 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA1P17096 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA1P17096 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.8□□□□□ -0.04
HMGA1P17096 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGA1P17096 AC012362.1-201ENST00000434906 739 ntBASIC14.8□□□□□ -0.04
HMGA1P17096 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGA1P17096 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HMGA1P17096 SLC25A15P3-201ENST00000505530 290 ntBASIC14.8□□□□□ -0.04
HMGA1P17096 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms