Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 DNM1P51-201ENST00000558149 522 ntBASIC14.64□□□□□ -0.07
CHRNB1P11230 AC068867.1-201ENST00000559855 150 ntBASIC14.64□□□□□ -0.07
CHRNB1P11230 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 AC011247.3-201ENST00000603297 438 ntBASIC14.64□□□□□ -0.07
CHRNB1P11230 AL591471.1-201ENST00000621855 229 ntBASIC14.64□□□□□ -0.07
CHRNB1P11230 AL451007.2-201ENST00000632004 563 ntBASIC14.64□□□□□ -0.07
CHRNB1P11230 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CHRNB1P11230 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
CHRNB1P11230 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNB1P11230 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.64□□□□□ -0.07
CHRNB1P11230 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNB1P11230 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNB1P11230 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.64□□□□□ -0.07
CHRNB1P11230 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHRNB1P11230 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.64□□□□□ -0.07
CHRNB1P11230 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.64□□□□□ -0.07
CHRNB1P11230 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CHRNB1P11230 CICP23-201ENST00000605013 2741 ntBASIC14.64□□□□□ -0.07
CHRNB1P11230 AC005840.4-201ENST00000541242 2494 ntBASIC14.64□□□□□ -0.07
CHRNB1P11230 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CHRNB1P11230 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB1P11230 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CHRNB1P11230 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB1P11230 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CHRNB1P11230 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB1P11230 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB1P11230 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB1P11230 AC006372.4-201ENST00000624122 1543 ntBASIC14.63□□□□□ -0.07
CHRNB1P11230 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRNB1P11230 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
CHRNB1P11230 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CHRNB1P11230 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB1P11230 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CHRNB1P11230 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRNB1P11230 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB1P11230 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.63□□□□□ -0.07
CHRNB1P11230 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.63□□□□□ -0.07
CHRNB1P11230 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC14.63□□□□□ -0.07
CHRNB1P11230 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB1P11230 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC14.63□□□□□ -0.07
CHRNB1P11230 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB1P11230 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB1P11230 RNF146-211ENST00000609447 607 ntTSL 4 BASIC14.63□□□□□ -0.07
CHRNB1P11230 AC009145.4-201ENST00000625119 1294 ntBASIC14.63□□□□□ -0.07
CHRNB1P11230 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CHRNB1P11230 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB1P11230 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNB1P11230 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.63□□□□□ -0.07
CHRNB1P11230 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 AC126755.1-201ENST00000525846 6405 ntBASIC14.63□□□□□ -0.07
CHRNB1P11230 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 TEKT4P2-202ENST00000559466 1312 ntBASIC14.63□□□□□ -0.07
CHRNB1P11230 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNB1P11230 AC136621.1-201ENST00000624017 2304 ntBASIC14.63□□□□□ -0.07
CHRNB1P11230 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CHRNB1P11230 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB1P11230 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB1P11230 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB1P11230 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.62□□□□□ -0.07
CHRNB1P11230 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB1P11230 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CHRNB1P11230 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB1P11230 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB1P11230 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CHRNB1P11230 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNB1P11230 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRNB1P11230 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms