Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
OPN1SWP03999 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.59□□□□□ -0.23
OPN1SWP03999 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
OPN1SWP03999 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.59□□□□□ -0.23
OPN1SWP03999 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
OPN1SWP03999 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
OPN1SWP03999 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
OPN1SWP03999 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.59□□□□□ -0.23
OPN1SWP03999 AC015818.8-201ENST00000587907 1519 ntBASIC13.59□□□□□ -0.23
OPN1SWP03999 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
OPN1SWP03999 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
OPN1SWP03999 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
OPN1SWP03999 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.58□□□□□ -0.23
OPN1SWP03999 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
OPN1SWP03999 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.23
OPN1SWP03999 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.58□□□□□ -0.24
OPN1SWP03999 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
OPN1SWP03999 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.58□□□□□ -0.24
OPN1SWP03999 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
OPN1SWP03999 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 AC236430.1-201ENST00000402231 743 ntBASIC13.58□□□□□ -0.24
OPN1SWP03999 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
OPN1SWP03999 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 AC068587.3-201ENST00000526613 355 ntBASIC13.58□□□□□ -0.24
OPN1SWP03999 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.58□□□□□ -0.24
OPN1SWP03999 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.58□□□□□ -0.24
OPN1SWP03999 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 MIR5189-201ENST00000577370 114 ntBASIC13.58□□□□□ -0.24
OPN1SWP03999 RN7SL204P-201ENST00000582831 262 ntBASIC13.58□□□□□ -0.24
OPN1SWP03999 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 RPSAP52-203ENST00000622976 1023 ntBASIC13.58□□□□□ -0.24
OPN1SWP03999 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.58□□□□□ -0.24
OPN1SWP03999 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.58□□□□□ -0.24
OPN1SWP03999 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.58□□□□□ -0.24
OPN1SWP03999 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
OPN1SWP03999 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
OPN1SWP03999 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
OPN1SWP03999 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
OPN1SWP03999 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.58□□□□□ -0.24
OPN1SWP03999 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.58□□□□□ -0.24
OPN1SWP03999 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 AP000593.2-201ENST00000542775 1433 ntBASIC13.57□□□□□ -0.24
OPN1SWP03999 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.57□□□□□ -0.24
OPN1SWP03999 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.57□□□□□ -0.24
OPN1SWP03999 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
OPN1SWP03999 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.57□□□□□ -0.24
OPN1SWP03999 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.57□□□□□ -0.24
OPN1SWP03999 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.57□□□□□ -0.24
OPN1SWP03999 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.57□□□□□ -0.24
OPN1SWP03999 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.57□□□□□ -0.24
OPN1SWP03999 FAM207CP-201ENST00000443486 507 ntBASIC13.57□□□□□ -0.24
OPN1SWP03999 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.57□□□□□ -0.24
OPN1SWP03999 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
OPN1SWP03999 ALG3P1-201ENST00000508806 1114 ntBASIC13.57□□□□□ -0.24
OPN1SWP03999 PTP4A1P2-201ENST00000546033 454 ntBASIC13.57□□□□□ -0.24
OPN1SWP03999 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.57□□□□□ -0.24
OPN1SWP03999 AC190387.1-201ENST00000551683 408 ntBASIC13.57□□□□□ -0.24
OPN1SWP03999 AC106820.3-201ENST00000561653 397 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms